RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 LINC00271P0C7V0 271 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 GDF10P55107 478 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 GBE1Q04446 702 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 DHX9Q08211 1270 aaKnown RBP22.34■■□□□ 1.17
USP6NL-204ENST00000606752 XRCC4Q13426 336 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 DPYSQ14117 519 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 P3H1Q32P28 736 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 FAM72AQ5TYM5 149 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 ALS2CLQ60I27 953 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 FAM72DQ6L9T8 149 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 RHBDF2Q6PJF5 856 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 BZW1Q7L1Q6 419 aaKnown RBP22.34■■□□□ 1.17
USP6NL-204ENST00000606752 FAM72BQ86X60 149 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 FAM71DQ8N9W8 422 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 CLP1Q92989 425 aaKnown RBP22.34■■□□□ 1.17
USP6NL-204ENST00000606752 OSBPL2Q9H1P3 480 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 ETNK2Q9NVF9 386 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 OR12D3Q9UGF7 316 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 BCLAF3A2AJT9 711 aaKnown RBP22.33■■□□□ 1.16
USP6NL-204ENST00000606752 PPFIA2O75334 1257 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 SEC24AO95486 1093 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 RARGP13631 454 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 SLC10A2Q12908 348 aaPredicted RBP22.33■■□□□ 1.16
USP6NL-204ENST00000606752 GPS1Q13098 491 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 GPS2Q13227 327 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 PPP2R5DQ14738 602 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 RASIP1Q5U651 963 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 IZUMO3Q5VZ72 239 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 HERVK_113Q902F9 699 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 HAPLN3Q96S86 360 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 EPAS1Q99814 870 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 TXLNGYQ9BZA5 131 aa22.33■■□□□ 1.16
USP6NL-204ENST00000606752 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.33■■□□□ 1.16
USP6NL-204ENST00000606752 OLA1Q9NTK5 396 aaKnown RBP22.33■■□□□ 1.16
USP6NL-204ENST00000606752 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.33■■□□□ 1.16
USP6NL-204ENST00000606752 CFAP69A5D8W1 941 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 MSI1O43347 362 aaKnown RBP22.32■■□□□ 1.16
USP6NL-204ENST00000606752 ZDHHC11BP0C7U3 371 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 TPI1P60174 286 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 PHOSPHO2Q8TCD6 241 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 RAD9AQ99638 391 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 USP29Q9HBJ7 922 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 DTLQ9NZJ0 730 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 FNIP2Q9P278 1114 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 TLR6Q9Y2C9 796 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 SLC4A7Q9Y6M7 1214 aa22.32■■□□□ 1.16
USP6NL-204ENST00000606752 DNALI1O14645 258 aaPredicted RBP22.31■■□□□ 1.16
USP6NL-204ENST00000606752 NDC80O14777 642 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 DCLK1O15075 740 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 DNAJB2P25686 324 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 HERC6Q8IVU3 1022 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 IQCKQ8N0W5 287 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 KRT222Q8N1A0 295 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 AUTS2Q8WXX7 1259 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 UBE2OQ9C0C9 1292 aaKnown RBP22.31■■□□□ 1.16
USP6NL-204ENST00000606752 TSPYL1Q9H0U9 437 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 ADAM7Q9H2U9 754 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 CYP4F11Q9HBI6 524 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 TPX2Q9ULW0 747 aaKnown RBP22.31■■□□□ 1.16
USP6NL-204ENST00000606752 MAGED2Q9UNF1 606 aaPredicted RBP22.31■■□□□ 1.16
USP6NL-204ENST00000606752 PLXNA3P51805 1871 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 GOLGA6BA6NDN3 693 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 LILRB3O75022 631 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 MAP3K6O95382 1288 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 RPL22P35268 128 aaKnown RBP22.31■■□□□ 1.16
USP6NL-204ENST00000606752 HSD17B3P37058 310 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 PAFAH1B3Q15102 231 aaKnown RBP22.31■■□□□ 1.16
USP6NL-204ENST00000606752 CFAP58Q5T655 872 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 HIBCHQ6NVY1 386 aaPredicted RBP22.31■■□□□ 1.16
USP6NL-204ENST00000606752 B4GALNT4Q76KP1 1039 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 CDKL3Q8IVW4 592 aaPredicted RBP22.31■■□□□ 1.16
USP6NL-204ENST00000606752 MAFFQ9ULX9 164 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 SSX2IPQ9Y2D8 614 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 ATP8A1Q9Y2Q0 1164 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 MFHAS1Q9Y4C4 1052 aa22.31■■□□□ 1.16
USP6NL-204ENST00000606752 SPDYE4A6NLX3 237 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 KCNU1A8MYU2 1149 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 SLC2A3P11169 496 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 SYN1P17600 705 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 ERCC2P18074 760 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 ALDH1A3P47895 512 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 CREMQ03060 361 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 SLMAPQ14BN4 828 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 SPDYCQ5MJ68 293 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 RTP4Q96DX8 246 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 SLC39A13Q96H72 371 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 ZBP1Q9H171 429 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 RXFP1Q9HBX9 757 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 PTPRSQ13332 1948 aa22.3■■□□□ 1.16
USP6NL-204ENST00000606752 ALPK3Q96L96 1907 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 PAGE1O75459 146 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 LRIG2O94898 1065 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 CSH1P0DML2 217 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 CSH2P0DML3 217 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 CTSAP10619 480 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 RBL1P28749 1068 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 EFEMP1Q12805 493 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 SLC45A4Q5BKX6 768 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 PDZD4Q76G19 769 aaPredicted RBP22.29■■□□□ 1.16
USP6NL-204ENST00000606752 PCGF5Q86SE9 256 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms