RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CYBBP04839 570 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 IGHV4-34P06331 123 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 ITGAVP06756 1048 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 FAM200BP0CF97 657 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 ADORA2BP29275 332 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CORO1AP31146 461 aaKnown RBP12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 ACTN2P35609 894 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 STAT6P42226 847 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 BIRC3Q13489 604 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 ZNF667Q5HYK9 610 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 TADA2BQ86TJ2 420 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CCDC65Q8IXS2 484 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 EID2Q8N6I1 236 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 FAM181AQ8N9Y4 354 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CLIC6Q96NY7 704 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 ARID3AQ99856 593 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 RASAL2Q9UJF2 1139 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 FBXO2Q9UK22 296 aaPredicted RBP12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 AGO1Q9UL18 857 aaKnown RBP12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 ZNF510Q9Y2H8 683 aa12.35□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CABIN1Q9Y6J0 2220 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 FAM47DPA6NHR8 397 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 HHLA1C9JL84 531 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 RPS14P62263 151 aaKnown RBP12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 RACK1P63244 317 aaKnown RBP12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 ZBTB16Q05516 673 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 KCNH2Q12809 1159 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 SHBQ15464 509 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 TBC1D25Q3MII6 688 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 TTC31Q49AM3 519 aaPredicted RBP12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 KIAA0895LQ68EN5 471 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CCDC73Q6ZRK6 1079 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CLEC20AQ6ZU45 233 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 BRAPQ7Z569 592 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 SCD5Q86SK9 330 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 FMNL3Q8IVF7 1028 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 C12orf29Q8N999 325 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 SAP25Q8TEE9 199 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 DDI1Q8WTU0 396 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CYB5D2Q8WUJ1 264 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 LGMNQ99538 433 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 PANK2Q9BZ23 570 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 SEMA4CQ9C0C4 833 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 TMEM245Q9H330 911 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 VRTNQ9H8Y1 702 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 SGK2Q9HBY8 427 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 PCDHA5Q9Y5H7 936 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 MYO18AQ92614 2054 aaKnown RBP12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 MYOFQ9NZM1 2061 aa12.34□□□□□ -0.43
PDLIM1P1-201ENST00000604187 UBR5O95071 2799 aaPredicted RBP12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CLIC2O15247 247 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TIMM44O43615 452 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 GLDCP23378 1020 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 EPHA8P29322 1005 aaPredicted RBP12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CASP4P49662 377 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 NDST1P52848 882 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 RHDQ02161 417 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 KCNC4Q03721 635 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 EFEMP1Q12805 493 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 NCOA4Q13772 614 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 DENND1CQ8IV53 801 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 XXYLT1Q8NBI6 393 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 GANCQ8TET4 914 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TSC1Q92574 1164 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 NAF1Q96HR8 494 aaKnown RBP12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SLC2A11Q9BYW1 496 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 DCLK3Q9C098 648 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 FBRSQ9HAH7 460 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PRSS16Q9NQE7 514 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 AASDHPPTQ9NRN7 309 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PLA2G4CQ9UP65 541 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CLIC4Q9Y696 253 aa12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 MUC22E2RYF6 1773 aaPredicted RBP12.33□□□□□ -0.44
PDLIM1P1-201ENST00000604187 A0A087X0B3 334 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 A0A1W2PPC4 97 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 EIF3DO15371 548 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TGFB1I1O43294 461 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 GABBR2O75899 941 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 WNT1P04628 370 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 C7P10643 843 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 RALAP11233 206 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ARRB1P49407 418 aaPredicted RBP12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PSEN1P49768 467 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TMPRSS3P57727 454 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 COG7P83436 770 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 LY6DQ14210 128 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 BMT2Q1RMZ1 405 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ARHGAP40Q5TG30 622 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ZNF776Q68DI1 518 aaPredicted RBP12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 NELFCDQ8IXH7 590 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CRYBG2Q8N1P7 616 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 DCBLD1Q8N8Z6 715 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PLEKHO2Q8TD55 490 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SKA1Q96BD8 255 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 WBP1Q96G27 269 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CDK5RAP1Q96SZ6 601 aaKnown RBP12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CPNE5Q9HCH3 593 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 GDF3Q9NR23 364 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CLIC5Q9NZA1 410 aa12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CLCA2Q9UQC9 943 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms