RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ATG7O95352 703 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 MT-CO1P00395 513 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ENO2P09104 434 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-216ENST00000602557 RFX3P48380 749 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 STX5Q13190 355 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 BMPR2Q13873 1038 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 EML3Q32P44 896 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 DHFR2Q86XF0 187 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 DNAAF5Q86Y56 855 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 GALNT6Q8NCL4 622 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 PROX1Q92786 737 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ZSWIM1Q9BR11 485 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 MTG1Q9BT17 334 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-216ENST00000602557 TBC1D10AQ9BXI6 508 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ABI2Q9NYB9 513 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-216ENST00000602557 SLC9A8Q9Y2E8 581 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 PRIM2P49643 509 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 FAM83EQ2M2I3 478 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ALFQ53S48 1182 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 C11orf63Q6NUN7 778 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 TMEM26Q6ZUK4 368 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 MICALL2Q8IY33 904 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 CACTIN-AS1Q8N1I8 211 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 CNPY3Q9BT09 278 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 GTF2A1LQ9UNN4 478 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 TNPO2O14787 897 aaKnown RBP8.91□□□□□ -0.98
CSMD1-216ENST00000602557 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 PROCP04070 461 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 RBP3P10745 1247 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 DHDDSQ86SQ9 333 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 FNIP1Q8TF40 1166 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ANKS1AQ92625 1134 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 MARK4Q96L34 752 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 THAP2Q9H0W7 228 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 RNF181Q9P0P0 153 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 CRLS1Q9UJA2 301 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 SYNPO2Q9UMS6 1093 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ADGRB3O60242 1522 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 CHRM3P20309 590 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 CDH18Q13634 790 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 TTI2Q6NXR4 508 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ERICH5Q6P6B1 374 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 EPHX4Q8IUS5 362 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 C10orf53Q8N6V4 93 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 KAT2BQ92831 832 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 SCAF8Q9UPN6 1271 aaKnown RBP8.91□□□□□ -0.98
CSMD1-216ENST00000602557 C6orf222P0C671 652 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-216ENST00000602557 MLNP12872 115 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 RPS7P62081 194 aaKnown RBP8.91□□□□□ -0.98
CSMD1-216ENST00000602557 USF2Q15853 346 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-216ENST00000602557 CACHD1Q5VU97 1274 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 MZT2BQ6NZ67 158 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 IZUMO1Q8IYV9 350 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 FEZF2Q8TBJ5 459 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 UNKQ9C0B0 810 aaKnown RBP8.91□□□□□ -0.98
CSMD1-216ENST00000602557 PACSIN3Q9UKS6 424 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 GRID1Q9ULK0 1009 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 SETBP1Q9Y6X0 1596 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 PPP1R3GB7ZBB8 358 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 PCSK1P29120 753 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 FNTAP49354 379 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 ST8SIA6P61647 398 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 SKIV2LQ15477 1246 aaKnown RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 QPCTQ16769 361 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 SHROOM1Q2M3G4 852 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 PTPRHQ9HD43 1115 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 KLHL1Q9NR64 748 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 TBX20Q9UMR3 447 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 CDC40O60508 579 aaKnown RBP eCLIP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 ADRA2BP18089 450 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 DDX39BQ13838 428 aaKnown RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 PAPD7Q5XG87 772 aaKnown RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 KRT77Q7Z794 578 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 SLCO6A1Q86UG4 719 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 FBXO25Q8TCJ0 367 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 ISCA1Q9BUE6 129 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 UBXN6Q9BZV1 441 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 WDR37Q9Y2I8 494 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 SH3BP1Q9Y3L3 701 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 MTRF1O75570 445 aaKnown RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 CCNCP24863 283 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 SEPHS1P49903 392 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 HSF2Q03933 536 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 CCSAPQ6IQ19 270 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 SATL1Q86VE3 508 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 FBXO36Q8NEA4 188 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 RAET1EQ8TD07 263 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 EFCAB10A6NFE3 127 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 SLC26A4O43511 780 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 CCNT2O60583 730 aaKnown RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 SHBGP04278 402 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 KCTD4Q8WVF5 259 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 LPAR1Q92633 364 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 NUDT12Q9BQG2 462 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 A0A0G2JLW4 131 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 CHRNA5P30532 468 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 CHI3L1P36222 383 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 NUMBP49757 651 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 SV2CQ496J9 727 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 C2CD6Q53TS8 623 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms