RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 APTXQ7Z2E3 356 aaKnown RBP17.89■□□□□ 0.45
HERC3-214ENST00000601319 TAC4Q86UU9 113 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 ZDHHC17Q8IUH5 632 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 AOPEPQ8N6M6 819 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 TMEM35BQ8NCS4 154 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 EPS8L1Q8TE68 723 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 IPO4Q8TEX9 1081 aaKnown RBP17.89■□□□□ 0.45
HERC3-214ENST00000601319 DDX1Q92499 740 aaKnown RBP17.89■□□□□ 0.45
HERC3-214ENST00000601319 PIWIL1Q96J94 861 aaKnown RBP17.89■□□□□ 0.45
HERC3-214ENST00000601319 FCRL2Q96LA5 508 aaPredicted RBP17.89■□□□□ 0.45
HERC3-214ENST00000601319 SLC2A13Q96QE2 648 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 TJP2Q9UDY2 1190 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 GMEB2Q9UKD1 530 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 CEP192Q8TEP8 1941 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 NUP205Q92621 2012 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 CAPN9O14815 690 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 NPC1O15118 1278 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 ALDH1A2O94788 518 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 HNRNPLP14866 589 aaKnown RBP eCLIP17.88■□□□□ 0.45
HERC3-214ENST00000601319 NTSR1P30989 418 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 EIF4EBP2Q13542 120 aaPredicted RBP17.88■□□□□ 0.45
HERC3-214ENST00000601319 EIF4HQ15056 248 aaKnown RBP17.88■□□□□ 0.45
HERC3-214ENST00000601319 E2F5Q15329 346 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 KLHL40Q2TBA0 621 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 PTPN20Q4JDL3 420 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 FAM133BQ5BKY9 247 aaKnown RBP17.88■□□□□ 0.45
HERC3-214ENST00000601319 SYPL2Q5VXT5 272 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 EGFLAMQ63HQ2 1017 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 TMEM92Q6UXU6 159 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 PRR23BQ6ZRT6 265 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 SLC26A9Q7LBE3 791 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 ANKS1BQ7Z6G8 1248 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 ZNF677Q86XU0 584 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 GPR161Q8N6U8 529 aaKnown RBP17.88■□□□□ 0.45
HERC3-214ENST00000601319 MDGA1Q8NFP4 955 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 DDI1Q8WTU0 396 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 ZC3H10Q96K80 434 aaKnown RBP17.88■□□□□ 0.45
HERC3-214ENST00000601319 ERGIC2Q96RQ1 377 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 HINFPQ9BQA5 517 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 POLMQ9NP87 494 aaPredicted RBP17.88■□□□□ 0.45
HERC3-214ENST00000601319 FAM207AQ9NSI2 230 aaPredicted RBP17.88■□□□□ 0.45
HERC3-214ENST00000601319 THADAQ6YHU6 1953 aa17.88■□□□□ 0.45
HERC3-214ENST00000601319 CEP250Q9BV73 2442 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 EPHB6O15197 1021 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 ACSL4O60488 711 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 LRP3O75074 770 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 ERBB2P04626 1255 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 RETP07949 1114 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 SCNN1AP37088 669 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 KLK7P49862 253 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 SYCP1Q15431 976 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 ANO7Q6IWH7 933 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 FAM183BPQ6ZVS7 135 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 CEP68Q76N32 757 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 CACNA2D4Q7Z3S7 1137 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
HERC3-214ENST00000601319 NOP9Q86U38 636 aaKnown RBP17.87■□□□□ 0.45
HERC3-214ENST00000601319 C11orf74Q86VG3 221 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 ZNF557Q8N988 423 aaPredicted RBP17.87■□□□□ 0.45
HERC3-214ENST00000601319 ZNF397Q8NF99 534 aaPredicted RBP17.87■□□□□ 0.45
HERC3-214ENST00000601319 LOXL4Q96JB6 756 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 GABRG3Q99928 467 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 DDX50Q9BQ39 737 aaKnown RBP17.87■□□□□ 0.45
HERC3-214ENST00000601319 NOCTQ9UK39 431 aaKnown RBP17.87■□□□□ 0.45
HERC3-214ENST00000601319 LAMA1P25391 3075 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 DCHS1Q96JQ0 3298 aa17.87■□□□□ 0.45
HERC3-214ENST00000601319 DAB1O75553 588 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 TRUB2O95900 331 aaKnown RBP17.86■□□□□ 0.45
HERC3-214ENST00000601319 HOXB2P14652 356 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 PTMSP20962 102 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 CDK11BP21127 795 aaKnown RBP17.86■□□□□ 0.45
HERC3-214ENST00000601319 GABRB2P47870 512 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 POLR2FP61218 127 aaKnown RBP17.86■□□□□ 0.45
HERC3-214ENST00000601319 TAF5Q15542 800 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 GEN1Q17RS7 908 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 PIK3R6Q5UE93 754 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 NADSYN1Q6IA69 706 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 DCLK2Q8N568 766 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 FAM160A2Q8N612 972 aaPredicted RBP17.86■□□□□ 0.45
HERC3-214ENST00000601319 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.86■□□□□ 0.45
HERC3-214ENST00000601319 HJURPQ8NCD3 748 aaPredicted RBP17.86■□□□□ 0.45
HERC3-214ENST00000601319 OLIG1Q8TAK6 271 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 ADAM32Q8TC27 787 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 FUCA2Q9BTY2 467 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 SYNCQ9H7C4 482 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 CD248Q9HCU0 757 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 ZDHHC4Q9NPG8 344 aa17.86■□□□□ 0.45
HERC3-214ENST00000601319 A0A1W2PQF6 199 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 APOEP02649 317 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 ATP1A3P13637 1013 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 SLC6A4P31645 630 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 SOX5P35711 763 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 CDK17Q00537 523 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 SLC6A3Q01959 620 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 UBXN1Q04323 297 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 ENPP2Q13822 863 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 LPAL2Q16609 132 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 DCAF6Q58WW2 860 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 SDE2Q6IQ49 451 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 DHX40Q8IX18 779 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms