RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 RNF139Q8WU17 664 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 RXFP2Q8WXD0 754 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 RUBCNQ92622 972 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 SERPINB11Q96P15 392 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 MCEEQ96PE7 176 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 CCSER2Q9H7U1 834 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 CTTNBP2NLQ9P2B4 639 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 IP6K2Q9UHH9 426 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 ARHGAP26Q9UNA1 814 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 NAALADL1Q9UQQ1 740 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 CNOT1A5YKK6 2376 aaKnown RBP12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 WDFY3Q8IZQ1 3526 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 FRYQ5TBA9 3013 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 KANSL1LA0AUZ9 987 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 IRAK2O43187 625 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 GRAP2O75791 330 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 TRUB2O95900 331 aaKnown RBP12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 IGLV3-27P01718 113 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 ATXN8OSP0DMR3 200 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 DESP17661 470 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 CEBPBP17676 345 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 HDCP19113 662 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 GBP1P32455 592 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 PCK1P35558 622 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 COG7P83436 770 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 OGDHQ02218 1023 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 FZD5Q13467 585 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 IFI16Q16666 785 aaKnown RBP12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 RSPO4Q2I0M5 234 aaPredicted RBP12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 C10orf120Q5SQS8 335 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 GPR158Q5T848 1215 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 OTUD1Q5VV17 481 aaPredicted RBP12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 TXNDC8Q6A555 127 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 RSRC2Q7L4I2 434 aaKnown RBP12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 PHLDB2Q86SQ0 1253 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 DDX42Q86XP3 938 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 CMTM8Q8IZV2 173 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 FGF13Q92913 245 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC39A13Q96H72 371 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC46A2Q9BY10 475 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 PLA2G2FQ9BZM2 168 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 KIF9Q9HAQ2 790 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 OSGEPQ9NPF4 335 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 OBP2AQ9NY56 170 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 MARCH2Q9P0N8 246 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 MYO1AQ9UBC5 1043 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 ANAPC7Q9UJX3 599 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 CDH7Q9ULB5 785 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 TLR6Q9Y2C9 796 aa12.12□□□□□ -0.47
CHMP2A-207ENST00000600804 C2orf78A6NCI8 922 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 KRT37O76014 449 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 PROSCO94903 275 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 GJB6O95452 261 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 LATS1O95835 1130 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 TBX18O95935 607 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 ABL1P00519 1130 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC2A3P11169 496 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 TGM1P22735 817 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC1A1P43005 524 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 CXCR3P49682 368 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 RNASE9P60153 205 aaKnown RBP12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 CYP4F8P98187 520 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 ZNF252P-AS1Q0IIN9 211 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 PPP2R5DQ14738 602 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 TRIP4Q15650 581 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 MLF2Q15773 248 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 ACBD5Q5T8D3 534 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 C11orf63Q6NUN7 778 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 TSSK4Q6SA08 328 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 TAC4Q86UU9 113 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 REXO1L1PQ8IX06 675 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 EMC1Q8N766 993 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 ARL14EPQ8N8R7 260 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 MAB21L3Q8N8X9 362 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 ZBTB44Q8NCP5 570 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 TPCN2Q8NHX9 752 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 KIAA1524Q8TCG1 905 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 EDEM1Q92611 657 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 NELL1Q92832 810 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 AZIN2Q96A70 460 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 E2F7Q96AV8 911 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 TRIM44Q96DX7 344 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 ZFRQ96KR1 1074 aaKnown RBP12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 CNTNAP3BQ96NU0 1288 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 HINFPQ9BQA5 517 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 KXD1Q9BQD3 176 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 KLF16Q9BXK1 252 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 CNTNAP3Q9BZ76 1288 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 RNF38Q9H0F5 515 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 LTB4R2Q9NPC1 389 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 SALL4Q9UJQ4 1053 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 PYCARDQ9ULZ3 195 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 PAXBP1Q9Y5B6 917 aa12.11□□□□□ -0.47
CHMP2A-207ENST00000600804 ATG2BQ96BY7 2078 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 FAM170AA1A519 330 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 GJA1P17302 382 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 PSMA2P25787 234 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 TARSP26639 723 aaKnown RBP12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 RDXP35241 583 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms