RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 THAP10Q9P2Z0 257 aaPredicted RBP16.3■□□□□ 0.2
IRF3-226ENST00000600453 GON4LQ3T8J9 2241 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 TYW5A2RUC4 315 aaKnown RBP16.29■□□□□ 0.2
IRF3-226ENST00000600453 AP5Z1O43299 807 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 TPM2P07951 284 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 EEF1GP26641 437 aaKnown RBP16.29■□□□□ 0.2
IRF3-226ENST00000600453 KRT9P35527 623 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 WASP42768 502 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 DHPSP49366 369 aaPredicted RBP16.29■□□□□ 0.2
IRF3-226ENST00000600453 YWHAZP63104 245 aaKnown RBP16.29■□□□□ 0.2
IRF3-226ENST00000600453 DENND1BQ6P3S1 775 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 CCDC117Q8IWD4 279 aaPredicted RBP16.29■□□□□ 0.2
IRF3-226ENST00000600453 WFIKKN2Q8TEU8 576 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 LHX5Q9H2C1 402 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 POPDC2Q9HBU9 364 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 SLC12A6Q9UHW9 1150 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 HCN2Q9UL51 889 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 PCDHGC3Q9UN70 934 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 PLA2G4CQ9UP65 541 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 TLR6Q9Y2C9 796 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 CEP83Q9Y592 693 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 STON1Q9Y6Q2 735 aa16.29■□□□□ 0.2
IRF3-226ENST00000600453 A0A1W2PQF6 199 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 PES1O00541 588 aaKnown RBP16.28■□□□□ 0.2
IRF3-226ENST00000600453 MSI1O43347 362 aaKnown RBP16.28■□□□□ 0.2
IRF3-226ENST00000600453 ACSL4O60488 711 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 SYNCRIPO60506 623 aaKnown RBP16.28■□□□□ 0.2
IRF3-226ENST00000600453 TSPAN3O60637 253 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 CALCAP01258 141 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 IGLV3-27P01718 113 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 GLI1P08151 1106 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 GABRG2P18507 467 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 MTA1Q13330 715 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 GEN1Q17RS7 908 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 MAP7D1Q3KQU3 841 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 EFHC1Q5JVL4 640 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 IL31Q6EBC2 164 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 CYP2U1Q7Z449 544 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 METTL3Q86U44 580 aaKnown RBP16.28■□□□□ 0.2
IRF3-226ENST00000600453 CLEC4CQ8WTT0 213 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 RLN3Q8WXF3 142 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 ACOX2Q99424 681 aa16.28■□□□□ 0.2
IRF3-226ENST00000600453 CACNA1AO00555 2505 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 BECN2A8MW95 431 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 KCNJ18B7U540 433 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 KHNYNO15037 678 aaKnown RBP16.27■□□□□ 0.2
IRF3-226ENST00000600453 SLC2A3P11169 496 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 HOXD9P28356 352 aaPredicted RBP16.27■□□□□ 0.2
IRF3-226ENST00000600453 ENPP2Q13822 863 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 KCNJ12Q14500 433 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 SF3A2Q15428 464 aaKnown RBP16.27■□□□□ 0.2
IRF3-226ENST00000600453 PIK3R6Q5UE93 754 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 ENOX1Q8TC92 643 aaKnown RBP16.27■□□□□ 0.2
IRF3-226ENST00000600453 DQX1Q8TE96 717 aaKnown RBP16.27■□□□□ 0.2
IRF3-226ENST00000600453 PPP1R13BQ96KQ4 1090 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 CIPCQ9C0C6 399 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 TMEM51Q9NW97 253 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.27■□□□□ 0.23e-8■□□□□ 10.2
IRF3-226ENST00000600453 ASNSD1Q9NWL6 643 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 CACNA2D2Q9NY47 1150 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 NAALADL1Q9UQQ1 740 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 NUP205Q92621 2012 aa16.27■□□□□ 0.2
IRF3-226ENST00000600453 E5RJQ4 531 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 FOXN3O00409 490 aaPredicted RBP16.26■□□□□ 0.19
IRF3-226ENST00000600453 PAPSS1O43252 624 aaPredicted RBP16.26■□□□□ 0.19
IRF3-226ENST00000600453 APOEP02649 317 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 FYNP06241 537 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 ATP5BP06576 529 aaKnown RBP16.26■□□□□ 0.19
IRF3-226ENST00000600453 BCKDHBP21953 392 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 HOXD12P35452 270 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 CDK17Q00537 523 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 PDCLQ13371 301 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 CCDC6Q16204 474 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 TCP11X2Q5H9J9 407 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 RABEPKQ7Z6M1 372 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 SYT12Q8IV01 421 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 AHI1Q8N157 1196 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 PDCL3Q9H2J4 239 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 SIX2Q9NPC8 291 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 CALCOCO1Q9P1Z2 691 aa16.26■□□□□ 0.19
IRF3-226ENST00000600453 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 DCDC2BA2VCK2 349 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 WASH3PC4AMC7 463 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 GDF9O60383 454 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 TBL1XO60907 577 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 NDUFS2O75306 463 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 OXTRP30559 389 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 CLCN1P35523 988 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 RPL6Q02878 288 aaKnown RBP16.25■□□□□ 0.19
IRF3-226ENST00000600453 ZNF234Q14588 700 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 MIIPQ5JXC2 388 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 SYPL2Q5VXT5 272 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 LYSMD4Q5XG99 296 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 RNF43Q68DV7 783 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 KIAA1211LQ6NV74 962 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 SASS6Q6UVJ0 657 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 SERPINA13PQ6UXR4 307 aa16.25■□□□□ 0.19
IRF3-226ENST00000600453 CHST9Q7L1S5 443 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms