RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 IGHV1OR15-9A0A0B4J2B8 117 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 WASH3PC4AMC7 463 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 IRAK2O43187 625 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 IGLV3-27P01718 113 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 HOXD9P28356 352 aaPredicted RBP16.47■□□□□ 0.23
VRK3-221ENST00000600284 IRX4P78413 519 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 NNTQ13423 1086 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 SLC23A3Q6PIS1 610 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 BEND5Q7L4P6 421 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 RABEPKQ7Z6M1 372 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 CEP76Q8TAP6 659 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 WFIKKN2Q8TEU8 576 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 TRIM62Q9BVG3 475 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 NUSAP1Q9BXS6 441 aaKnown RBP16.47■□□□□ 0.23
VRK3-221ENST00000600284 TMEM9BQ9NQ34 198 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 PILRBQ9UKJ0 227 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 CLEC4EQ9ULY5 219 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 RAD54BQ9Y620 910 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 NCOR2Q9Y618 2525 aa16.47■□□□□ 0.23
VRK3-221ENST00000600284 GTPBP10A4D1E9 387 aaKnown RBP16.46■□□□□ 0.23
VRK3-221ENST00000600284 C4orf47A7E2U8 309 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 PATE3B3GLJ2 98 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 MSI1O43347 362 aaKnown RBP16.46■□□□□ 0.23
VRK3-221ENST00000600284 SYNCRIPO60506 623 aaKnown RBP16.46■□□□□ 0.23
VRK3-221ENST00000600284 KRT5P13647 590 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 IL12RB1P42701 662 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 SLC11A2P49281 568 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 FUT11Q495W5 492 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 TRIM61Q5EBN2 209 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 TRIM65Q6PJ69 517 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 GBP6Q6ZN66 633 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 ZNF557Q8N988 423 aaPredicted RBP16.46■□□□□ 0.23
VRK3-221ENST00000600284 ZNF606Q8WXB4 792 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 SLC4A5Q9BY07 1137 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 TMEM74BQ9NUR3 256 aa16.46■□□□□ 0.23
VRK3-221ENST00000600284 PIK3R2O00459 728 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 CDX4O14627 284 aaPredicted RBP16.45■□□□□ 0.22
VRK3-221ENST00000600284 ACSL4O60488 711 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 TSPAN3O60637 253 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 CALCAP01258 141 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 NCAM1P13591 858 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 PRKCSHP14314 528 aaPredicted RBP16.45■□□□□ 0.22
VRK3-221ENST00000600284 ITPKAP23677 461 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 TBX4P57082 545 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 ARID5AQ03989 594 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 ZNF33AQ06730 810 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 ZNF234Q14588 700 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 DUOXA1Q1HG43 343 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 TMEM215Q68D42 235 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 ARMCX6Q7L4S7 300 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 KIAA0907Q7Z7F0 614 aaPredicted RBP16.45■□□□□ 0.22
VRK3-221ENST00000600284 TMEM110Q86TL2 294 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 SCUBE3Q8IX30 993 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.45■□□□□ 0.22
VRK3-221ENST00000600284 CLEC4CQ8WTT0 213 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 FOXJ1Q92949 421 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 ZNF419Q96HQ0 510 aaPredicted RBP16.45■□□□□ 0.22
VRK3-221ENST00000600284 SERPINB11Q96P15 392 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 MED15Q96RN5 788 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 DDX50Q9BQ39 737 aaKnown RBP16.45■□□□□ 0.22
VRK3-221ENST00000600284 CIPCQ9C0C6 399 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 MIS12Q9H081 205 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 PRDM16Q9HAZ2 1276 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 ITM2CQ9NQX7 267 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 ST7Q9NRC1 585 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 CYP8B1Q9UNU6 501 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 TLR6Q9Y2C9 796 aa16.45■□□□□ 0.22
VRK3-221ENST00000600284 NDUFS2O75306 463 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 LETM1O95202 739 aaPredicted RBP16.44■□□□□ 0.22
VRK3-221ENST00000600284 KCNK5O95279 499 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 FYNP06241 537 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 HLA-FP30511 346 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 GNA15P30679 374 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 EXOC3L4Q17RC7 722 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 PIK3R6Q5UE93 754 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 IRF2BP1Q8IU81 584 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 CREBRFQ8IUR6 639 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 CRACR2AQ9BSW2 395 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 MKRN2Q9H000 416 aaKnown RBP16.44■□□□□ 0.22
VRK3-221ENST00000600284 USP36Q9P275 1121 aaKnown RBP16.44■□□□□ 0.22
VRK3-221ENST00000600284 APEX2Q9UBZ4 518 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 SLC6A14Q9UN76 642 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 PLA2G4CQ9UP65 541 aa16.44■□□□□ 0.22
VRK3-221ENST00000600284 SPTBN2O15020 2390 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 THAP12O43422 761 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 SERPINF2P08697 491 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 C7P10643 843 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 SLC9A1P19634 815 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 CD6P30203 668 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 OXTRP30559 389 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 TPD52L1Q16890 204 aaPredicted RBP16.43■□□□□ 0.22
VRK3-221ENST00000600284 FAM133BQ5BKY9 247 aaKnown RBP16.43■□□□□ 0.22
VRK3-221ENST00000600284 SYCP2LQ5T4T6 812 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 N4BP2L1Q5TBK1 243 aaPredicted RBP16.43■□□□□ 0.22
VRK3-221ENST00000600284 DENND1BQ6P3S1 775 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 KIAA1324Q6UXG2 1013 aaKnown RBP16.43■□□□□ 0.22
VRK3-221ENST00000600284 SERPINA13PQ6UXR4 307 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 CHST9Q7L1S5 443 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 TMPRSS6Q8IU80 811 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 AHI1Q8N157 1196 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms