RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 EZH1Q92800 747 aaPredicted RBP13.38□□□□□ -0.27
SH2D3A-208ENST00000599563 PANX2Q96RD6 677 aa13.38□□□□□ -0.27
SH2D3A-208ENST00000599563 PPP1R9BQ96SB3 815 aa13.38□□□□□ -0.27
SH2D3A-208ENST00000599563 BBS2Q9BXC9 721 aa13.38□□□□□ -0.27
SH2D3A-208ENST00000599563 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
SH2D3A-208ENST00000599563 C2orf42Q9NWW7 574 aa13.38□□□□□ -0.27
SH2D3A-208ENST00000599563 TAS2R14Q9NYV8 317 aa13.38□□□□□ -0.27
SH2D3A-208ENST00000599563 MARCH2Q9P0N8 246 aa13.38□□□□□ -0.27
SH2D3A-208ENST00000599563 A0A087X0T9 212 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 TBC1D3BA6NDS4 549 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 SART1O43290 800 aaKnown RBP13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 MED7O43513 233 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 CACNG3O60359 315 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 GREM1O60565 184 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 STC2O76061 302 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 CYP1A1P04798 512 aaPredicted RBP13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 FAM228BP0C875 321 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 TNFAIP3P21580 790 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 CDH5P33151 784 aaPredicted RBP13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 ID4P47928 161 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 SLC6A11P48066 632 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 CCZ1BP86790 482 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 CCZ1P86791 482 aaPredicted RBP13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 KDSRQ06136 332 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 ADIGQ0VDE8 80 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 CCDC173Q0VFZ6 552 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 EFEMP1Q12805 493 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 ASTE1Q2TB18 679 aaPredicted RBP13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 C2CD6Q53TS8 623 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 NAA35Q5VZE5 725 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 GRAMD4Q6IC98 578 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 RAD9BQ6WBX8 426 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 ZNF677Q86XU0 584 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 TMEM25Q86YD3 366 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 DCLK2Q8N568 766 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 TERB1Q8NA31 727 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 SLC30A5Q8TAD4 765 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 IRGQQ8WZA9 623 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 ANP32BQ92688 251 aaKnown RBP13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 GOLGA1Q92805 767 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 PLD4Q96BZ4 506 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 HSFY1Q96LI6 401 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 ULBP1Q9BZM6 244 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 KCNF1Q9H3M0 494 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 POLMQ9NP87 494 aaPredicted RBP13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 ABCC13Q9NSE7 274 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 SPTLC3Q9NUV7 552 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 RASAL2Q9UJF2 1139 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 NENFQ9UMX5 172 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 HBS1LQ9Y450 684 aaKnown RBP13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 PLXND1Q9Y4D7 1925 aa13.37□□□□□ -0.27
SH2D3A-208ENST00000599563 TMCO5BA8MYB1 307 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 GOLGA6L6A8MZA4 724 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 NEDD8-MDP1E9PL57 170 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 FBXO21O94952 628 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 CYBBP04839 570 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 CCDC172P0C7W6 258 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 UNGP13051 313 aaPredicted RBP13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 TYRP14679 529 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 SEC13P55735 322 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 GSDMDP57764 484 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 GFPT1Q06210 699 aaPredicted RBP13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 BYSLQ13895 437 aaKnown RBP13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 ELF2Q15723 593 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 CRY1Q16526 586 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 CLEC16AQ2KHT3 1053 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 PTPN20Q4JDL3 420 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 USP39Q53GS9 565 aaKnown RBP13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 PMF1Q6P1K2 205 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 Q6ZNB5 142 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 ERMP1Q7Z2K6 904 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 PHTF2Q8N3S3 785 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 SLC35F5Q8WV83 523 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 CPA5Q8WXQ8 436 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 ZC3H10Q96K80 434 aaKnown RBP13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 HHIPQ96QV1 700 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 CPXM1Q96SM3 734 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 TRIM62Q9BVG3 475 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 PDCL3Q9H2J4 239 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 NHEJ1Q9H9Q4 299 aaPredicted RBP13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 DNAJC17Q9NVM6 304 aaKnown RBP13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 ZNHIT6Q9NWK9 470 aaKnown RBP13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 NUDT5Q9UKK9 219 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 USP18Q9UMW8 372 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 STARD13Q9Y3M8 1113 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 CACNA1AO00555 2505 aa13.36□□□□□ -0.27
SH2D3A-208ENST00000599563 SSU72P8A0A1W2PR75 194 aa13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 MDM4O15151 490 aa13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 ZBTB24O43167 697 aaPredicted RBP13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 RHOBTB1O94844 696 aa13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 LATS1O95835 1130 aa13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 CORO1AP31146 461 aaKnown RBP13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 KIR2DL1P43626 348 aaPredicted RBP13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 ACADSBP45954 432 aa13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 PXNP49023 591 aaPredicted RBP13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 HARS2P49590 506 aaKnown RBP13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 CDK17Q00537 523 aa13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 PDCLQ13371 301 aa13.35□□□□□ -0.27
SH2D3A-208ENST00000599563 PUM1Q14671 1186 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms