RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 ELAVL2Q12926 359 aaKnown RBP11.01□□□□□ -0.65
SMG9-207ENST00000598860 PPP2R5DQ14738 602 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 UPP1Q16831 310 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 KLHDC7AQ5VTJ3 777 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 CACNA2D4Q7Z3S7 1137 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 TMC6Q7Z403 805 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 ZNF397Q8NF99 534 aaPredicted RBP11.01□□□□□ -0.65
SMG9-207ENST00000598860 MFSD3Q96ES6 412 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 IGSF21Q96ID5 467 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 Q96M66 194 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 CDCA3Q99618 268 aaPredicted RBP11.01□□□□□ -0.65
SMG9-207ENST00000598860 IER2Q9BTL4 223 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 DNAI2Q9GZS0 605 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 XYLT2Q9H1B5 865 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 GANQ9H2C0 597 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 CYP3A43Q9HB55 503 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 GOLGA2P5Q9HBQ8 144 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 SIX2Q9NPC8 291 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 FAM207AQ9NSI2 230 aaPredicted RBP11.01□□□□□ -0.65
SMG9-207ENST00000598860 GDAP2Q9NXN4 497 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 DNAJB4Q9UDY4 337 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 STK39Q9UEW8 545 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 MYO6Q9UM54 1294 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 FAM50BQ9Y247 325 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 FAN1Q9Y2M0 1017 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 NUB1Q9Y5A7 615 aa11.01□□□□□ -0.65
SMG9-207ENST00000598860 ATG2AQ2TAZ0 1938 aa11□□□□□ -0.65
SMG9-207ENST00000598860 KPNA7A9QM74 516 aa11□□□□□ -0.65
SMG9-207ENST00000598860 LINC01565O15544 149 aa11□□□□□ -0.65
SMG9-207ENST00000598860 TRAPPC3O43617 180 aa11□□□□□ -0.65
SMG9-207ENST00000598860 RFPL3O75679 317 aa11□□□□□ -0.65
SMG9-207ENST00000598860 B3GAT3O94766 335 aa11□□□□□ -0.65
SMG9-207ENST00000598860 KCNH1O95259 989 aa11□□□□□ -0.65
SMG9-207ENST00000598860 CXCL14O95715 111 aa11□□□□□ -0.65
SMG9-207ENST00000598860 CBX7O95931 251 aa11□□□□□ -0.65
SMG9-207ENST00000598860 OR1G1P47890 313 aa11□□□□□ -0.65
SMG9-207ENST00000598860 SLC11A1P49279 550 aa11□□□□□ -0.65
SMG9-207ENST00000598860 AARSP49588 968 aaKnown RBP eCLIP11□□□□□ -0.65
SMG9-207ENST00000598860 NDUFV1P49821 464 aa11□□□□□ -0.65
SMG9-207ENST00000598860 CLCNKBP51801 687 aa11□□□□□ -0.65
SMG9-207ENST00000598860 SUMO1P63165 101 aaKnown RBP11□□□□□ -0.65
SMG9-207ENST00000598860 CCDC173Q0VFZ6 552 aa11□□□□□ -0.65
SMG9-207ENST00000598860 CUL2Q13617 745 aa11□□□□□ -0.65
SMG9-207ENST00000598860 SMC1AQ14683 1233 aaKnown RBP11□□□□□ -0.65
SMG9-207ENST00000598860 WDR72Q3MJ13 1102 aa11□□□□□ -0.65
SMG9-207ENST00000598860 TM4SF20Q53R12 229 aa11□□□□□ -0.65
SMG9-207ENST00000598860 PLPP4Q5VZY2 271 aa11□□□□□ -0.65
SMG9-207ENST00000598860 TMC3Q7Z5M5 1100 aa11□□□□□ -0.65
SMG9-207ENST00000598860 DDX53Q86TM3 631 aaKnown RBP11□□□□□ -0.65
SMG9-207ENST00000598860 CNGA4Q8IV77 575 aa11□□□□□ -0.65
SMG9-207ENST00000598860 VPS52Q8N1B4 723 aa11□□□□□ -0.65
SMG9-207ENST00000598860 PPM1KQ8N3J5 372 aa11□□□□□ -0.65
SMG9-207ENST00000598860 MRPL43Q8N983 215 aaKnown RBP11□□□□□ -0.65
SMG9-207ENST00000598860 DTWD2Q8NBA8 298 aa11□□□□□ -0.65
SMG9-207ENST00000598860 FAM84AQ96KN4 292 aa11□□□□□ -0.65
SMG9-207ENST00000598860 SPAG5Q96R06 1193 aa11□□□□□ -0.65
SMG9-207ENST00000598860 PI4K2AQ9BTU6 479 aa11□□□□□ -0.65
SMG9-207ENST00000598860 TTYH3Q9C0H2 523 aa11□□□□□ -0.65
SMG9-207ENST00000598860 DSEQ9UL01 958 aa11□□□□□ -0.65
SMG9-207ENST00000598860 MTCL1Q9Y4B5 1905 aaKnown RBP10.99□□□□□ -0.65
SMG9-207ENST00000598860 BDP1A6H8Y1 2624 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 REV3LO60673 3130 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 NRP1O14786 923 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 HUS1O60921 280 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 CCDC172P0C7W6 258 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 ODC1P11926 461 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 CA8P35219 290 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 KLK7P49862 253 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 GSDMDP57764 484 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 LILRA4P59901 499 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 POLR2FP61218 127 aaKnown RBP10.99□□□□□ -0.65
SMG9-207ENST00000598860 ZBED6P86452 979 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 DLX2Q07687 328 aaPredicted RBP10.99□□□□□ -0.65
SMG9-207ENST00000598860 LRMPQ12912 555 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 CLUL1Q15846 466 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 IFI16Q16666 785 aaKnown RBP10.99□□□□□ -0.65
SMG9-207ENST00000598860 DUSP6Q16828 381 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 FNDC3BQ53EP0 1204 aaKnown RBP10.99□□□□□ -0.65
SMG9-207ENST00000598860 GTF2IRD2BQ6EKJ0 949 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 DPY19L2P1Q6NXN4 242 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 DSTYKQ6XUX3 929 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 GTF2IRD2Q86UP8 949 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 TMEM86AQ8N2M4 240 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 NAA15Q9BXJ9 866 aaKnown RBP10.99□□□□□ -0.65
SMG9-207ENST00000598860 STK33Q9BYT3 514 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 APOBEC3GQ9HC16 384 aaKnown RBP10.99□□□□□ -0.65
SMG9-207ENST00000598860 UBE2TQ9NPD8 197 aaPredicted RBP10.99□□□□□ -0.65
SMG9-207ENST00000598860 CD207Q9UJ71 328 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 DNAJC12Q9UKB3 198 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 ADAM28Q9UKQ2 775 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 CAPN11Q9UMQ6 739 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 LUC7L2Q9Y383 392 aaKnown RBP10.99□□□□□ -0.65
SMG9-207ENST00000598860 SNX9Q9Y5X1 595 aa10.99□□□□□ -0.65
SMG9-207ENST00000598860 SF3B1O75533 1304 aaKnown RBP eCLIP10.99□□□□□ -0.653e-13■■■■■ 86.2
SMG9-207ENST00000598860 EYSQ5T1H1 3165 aa10.98□□□□□ -0.65
SMG9-207ENST00000598860 C2orf71A6NGG8 1288 aa10.98□□□□□ -0.65
SMG9-207ENST00000598860 HIDE1A8MVS5 230 aa10.98□□□□□ -0.65
SMG9-207ENST00000598860 M0QZQ0 153 aa10.98□□□□□ -0.65
SMG9-207ENST00000598860 PPEF2O14830 753 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms