RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 NAT16Q8N8M0 369 aa18.97■□□□□ 0.63
ZNF558-204ENST00000596172 OLIG1Q8TAK6 271 aa18.97■□□□□ 0.63
ZNF558-204ENST00000596172 PGAP3Q96FM1 320 aaPredicted RBP18.97■□□□□ 0.63
ZNF558-204ENST00000596172 P2RY11Q96G91 374 aa18.97■□□□□ 0.63
ZNF558-204ENST00000596172 NPY6RQ99463 290 aa18.97■□□□□ 0.63
ZNF558-204ENST00000596172 HAUS4Q9H6D7 363 aa18.97■□□□□ 0.63
ZNF558-204ENST00000596172 PRMT8Q9NR22 394 aaPredicted RBP18.97■□□□□ 0.63
ZNF558-204ENST00000596172 ADAM22Q9P0K1 906 aa18.97■□□□□ 0.63
ZNF558-204ENST00000596172 LUC7L2Q9Y383 392 aaKnown RBP18.97■□□□□ 0.63
ZNF558-204ENST00000596172 BZW2Q9Y6E2 419 aaKnown RBP18.97■□□□□ 0.63
ZNF558-204ENST00000596172 KCNU1A8MYU2 1149 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 F9P00740 461 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 APOEP02649 317 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 CISD3P0C7P0 127 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 CCR1P32246 355 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 RNASE9P60153 205 aaKnown RBP18.96■□□□□ 0.63
ZNF558-204ENST00000596172 KLHL30Q0D2K2 578 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 MESP2Q0VG99 397 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 PPP2R5DQ14738 602 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 ZNF528Q3MIS6 628 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 SLC25A52Q3SY17 297 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 FAM133BQ5BKY9 247 aaKnown RBP18.96■□□□□ 0.63
ZNF558-204ENST00000596172 ZC3H12AQ5D1E8 599 aaKnown RBP18.96■□□□□ 0.63
ZNF558-204ENST00000596172 SPECC1LQ69YQ0 1117 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 ACAD10Q6JQN1 1059 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 SARM1Q6SZW1 724 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 MON1BQ7L1V2 547 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 ZNF571Q7Z3V5 609 aaPredicted RBP18.96■□□□□ 0.63
ZNF558-204ENST00000596172 KCNV2Q8TDN2 545 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 VCPIP1Q96JH7 1222 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 BTN2A3PQ96KV6 586 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 C11orf70Q9BRQ4 267 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 SLC2A11Q9BYW1 496 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 FAM204AQ9H8W3 233 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 SEPT11Q9NVA2 429 aaKnown RBP18.96■□□□□ 0.63
ZNF558-204ENST00000596172 DNAJC17Q9NVM6 304 aaKnown RBP18.96■□□□□ 0.63
ZNF558-204ENST00000596172 DDIT4Q9NX09 232 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 SLC12A6Q9UHW9 1150 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 STAP1Q9ULZ2 295 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 SLC27A6Q9Y2P4 619 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 MIA3Q5JRA6 1907 aa18.96■□□□□ 0.63
ZNF558-204ENST00000596172 CACNA1HO95180 2353 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 GOLGA8SH3BPF8 625 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 RNF40O75150 1001 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 GYPCP04921 128 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 GZMAP12544 262 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 CXCL12P48061 93 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 MRPS21P82921 87 aaKnown RBP18.95■□□□□ 0.62
ZNF558-204ENST00000596172 TRIM14Q14142 442 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 PIK3R6Q5UE93 754 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 RNF43Q68DV7 783 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 GRAMD4Q6IC98 578 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 TERB1Q8NA31 727 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 DDI1Q8WTU0 396 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 TMA16Q96EY4 203 aaKnown RBP18.95■□□□□ 0.62
ZNF558-204ENST00000596172 STARD13Q9Y3M8 1113 aa18.95■□□□□ 0.62
ZNF558-204ENST00000596172 TBC1D3BA6NDS4 549 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 H0Y858 1186 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 M0QYT0 321 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 CHRM1P11229 460 aaPredicted RBP18.94■□□□□ 0.62
ZNF558-204ENST00000596172 HOXA6P31267 233 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 FLT3P36888 993 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 DGKGP49619 791 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 CXCR3P49682 368 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 HSF5Q4G112 596 aaPredicted RBP18.94■□□□□ 0.62
ZNF558-204ENST00000596172 OTUD1Q5VV17 481 aaPredicted RBP18.94■□□□□ 0.62
ZNF558-204ENST00000596172 HGSNATQ68CP4 663 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 NADSYN1Q6IA69 706 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 BNIPLQ7Z465 357 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 VSTM4Q8IW00 320 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 DRC7Q8IY82 874 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 ATP6V0D2Q8N8Y2 350 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 C3orf20Q8ND61 904 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 USP33Q8TEY7 942 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 CPLX3Q8WVH0 158 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 FAM126AQ9BYI3 521 aaPredicted RBP18.94■□□□□ 0.62
ZNF558-204ENST00000596172 PLK2Q9NYY3 685 aa18.94■□□□□ 0.62
ZNF558-204ENST00000596172 GOLGA6L7A0A1B0GV03 622 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 TCRBV5S1A1TA0A578 114 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 SIGLEC16A6NMB1 481 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 DDX3XO00571 662 aaKnown RBP eCLIP18.93■□□□□ 0.625e-7■■■■■ 48
ZNF558-204ENST00000596172 ENDOD1O94919 500 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 SERPING1P05155 500 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 SP9P0CG40 484 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 KRT3P12035 628 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 SKILP12757 684 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 ABCB4P21439 1286 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 SLC6A4P31645 630 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 HNRNPH3P31942 346 aaKnown RBP18.93■□□□□ 0.62
ZNF558-204ENST00000596172 KIR2DL1P43626 348 aaPredicted RBP18.93■□□□□ 0.62
ZNF558-204ENST00000596172 KDSRQ06136 332 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 BRMS1LQ5PSV4 323 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 TRNP1Q6NT89 227 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 MCOLN2Q8IZK6 566 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 NELL1Q92832 810 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 BHMTQ93088 406 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 RNF34Q969K3 372 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 ACDQ96AP0 544 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 ADAM33Q9BZ11 813 aa18.93■□□□□ 0.62
ZNF558-204ENST00000596172 CALCOCO1Q9P1Z2 691 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms