RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZDHHC17Q8IUH5 632 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 CCAR2Q8N163 923 aaKnown RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 CELF5Q8N6W0 485 aaKnown RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 CCDC185Q8N715 623 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 DTWD2Q8NBA8 298 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 PDZD8Q8NEN9 1154 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 PJA1Q8NG27 643 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 BPIFB1Q8TDL5 484 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 FAM172AQ8WUF8 416 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 TRIM11Q96F44 468 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 VCPIP1Q96JH7 1222 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 CEP295NLQ96MC4 621 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 DDX23Q9BUQ8 820 aaKnown RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 TDP1Q9NUW8 608 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 FAM86C1Q9NVL1 165 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 DDIT4Q9NX09 232 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 GTSE1Q9NYZ3 720 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 CLIC5Q9NZA1 410 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 MARCH2Q9P0N8 246 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 WDR35Q9P2L0 1181 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 GUCA1BQ9UMX6 200 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 NDRG2Q9UN36 371 aaKnown RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 PIAS3Q9Y6X2 628 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 SHISA7A6NL88 538 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 CHADO15335 359 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 IRAK2O43187 625 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 SART1O43290 800 aaKnown RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 GREM1O60565 184 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 LRCH4O75427 683 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 MTA2O94776 668 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 FTCDO95954 541 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 MOCS2O96007 188 aaPredicted RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 KLKB1P03952 638 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 TNNT1P13805 278 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 GLULP15104 373 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 HDCP19113 662 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 TARSP26639 723 aaKnown RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 IL1R2P27930 398 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 WEE1P30291 646 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 SDC4P31431 198 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 SCNN1AP37088 669 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 NOP2P46087 812 aaKnown RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 DNA2P51530 1060 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 IRAK1P51617 712 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 KPNA1P52294 538 aaPredicted RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 ZNF143P52747 638 aaPredicted RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 PTPN5P54829 565 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 KRT83P78385 493 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 NHLH1Q02575 133 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 CA9Q16790 459 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 ZC3H12AQ5D1E8 599 aaKnown RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 TRIM68Q6AZZ1 485 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 ZNF852Q6ZMS4 543 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 BNIPLQ7Z465 357 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 CCDC105Q8IYK2 499 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 TPCN2Q8NHX9 752 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 CSGALNACT1Q8TDX6 532 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 OVCA2Q8WZ82 227 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 GOLGA1Q92805 767 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 DNASE1L2Q92874 299 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 FCRL2Q96LA5 508 aaPredicted RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 PHOX2BQ99453 314 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 KLF16Q9BXK1 252 aaPredicted RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 NACA2Q9H009 215 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 LTB4R2Q9NPC1 389 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 ABCC13Q9NSE7 274 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 CFAP97Q9P2B7 532 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 PCSK1NQ9UHG2 260 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 INTUQ9ULD6 942 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 PACSIN2Q9UNF0 486 aaPredicted RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 SCINQ9Y6U3 715 aa10.03□□□□□ -0.8
DDX39A-220ENST00000593008 HELZP42694 1942 aaKnown RBP10.03□□□□□ -0.8
DDX39A-220ENST00000593008 KMT2EQ8IZD2 1858 aa10.02□□□□□ -0.8
DDX39A-220ENST00000593008 GOLGA6L7A0A1B0GV03 622 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 LEFTY2O00292 366 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 TRDMT1O14717 391 aaKnown RBP10.02□□□□□ -0.81
DDX39A-220ENST00000593008 PALMO75781 387 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 PROSCO94903 275 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 GLI1P08151 1106 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 RALAP11233 206 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 ARSAP15289 507 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 NOS2P35228 1153 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 PTPN9P43378 593 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 TBX4P57082 545 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 SLC25A11Q02978 314 aaKnown RBP10.02□□□□□ -0.81
DDX39A-220ENST00000593008 KIF5AQ12840 1032 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 USP4Q13107 963 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 EIF4EBP2Q13542 120 aaPredicted RBP10.02□□□□□ -0.81
DDX39A-220ENST00000593008 SMTNL2Q2TAL5 461 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 SLC25A52Q3SY17 297 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 ATP13A4Q4VNC1 1196 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 ARHGAP29Q52LW3 1261 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 KCNT1Q5JUK3 1230 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 C10orf76Q5T2E6 689 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 NADSYN1Q6IA69 706 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 CC2D1AQ6P1N0 951 aaPredicted RBP10.02□□□□□ -0.81
DDX39A-220ENST00000593008 ANKS1BQ7Z6G8 1248 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 PYROXD2Q8N2H3 581 aa10.02□□□□□ -0.81
DDX39A-220ENST00000593008 ARHGAP18Q8N392 663 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms