RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CAPN10Q9HC96 672 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 ELOVL2Q9NXB9 296 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 USP36Q9P275 1121 aaKnown RBP13.86□□□□□ -0.19
APOC1-209ENST00000592885 PCDHB4Q9Y5E5 795 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 KMT2BQ9UMN6 2715 aaPredicted RBP13.85□□□□□ -0.19
APOC1-209ENST00000592885 M0QYV0 167 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 SART1O43290 800 aaKnown RBP13.85□□□□□ -0.19
APOC1-209ENST00000592885 SYNCRIPO60506 623 aaKnown RBP13.85□□□□□ -0.19
APOC1-209ENST00000592885 FBXO21O94952 628 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 IGLV3-19P01714 112 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 IGLV3-27P01718 113 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 CFIP05156 583 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 HOXD9P28356 352 aaPredicted RBP13.85□□□□□ -0.19
APOC1-209ENST00000592885 CD6P30203 668 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 OXTRP30559 389 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 ATXN3P54252 364 aaPredicted RBP13.85□□□□□ -0.19
APOC1-209ENST00000592885 ARID5AQ03989 594 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 GFPT1Q06210 699 aaPredicted RBP13.85□□□□□ -0.19
APOC1-209ENST00000592885 RING1Q06587 406 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 PAK1Q13153 545 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 MORC3Q14149 939 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 ZNF234Q14588 700 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 ST3GAL2Q16842 350 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 WDR45BQ5MNZ6 344 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 MPP7Q5T2T1 576 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 ADGRF1Q5T601 910 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 SMYD5Q6GMV2 418 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 SLC41A1Q8IVJ1 513 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 TRIM59Q8IWR1 403 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 UNC45BQ8IWX7 931 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.85□□□□□ -0.19
APOC1-209ENST00000592885 LMO3Q8TAP4 145 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 SLC35F5Q8WV83 523 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 NELFBQ8WX92 580 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 EDEM1Q92611 657 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 HSPA12BQ96MM6 686 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 SLC32A1Q9H598 525 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 FBRSQ9HAH7 460 aa13.85□□□□□ -0.19
APOC1-209ENST00000592885 CACNA1BQ00975 2339 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 PPP1R3GB7ZBB8 358 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 WASH3PC4AMC7 463 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 IRAK2O43187 625 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 FGFR1OPO95684 399 aaKnown RBP13.84□□□□□ -0.19
APOC1-209ENST00000592885 LTFP02788 710 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 SYPP08247 313 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 C7P10643 843 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 NCAM1P13591 858 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 LCP1P13796 627 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 GNSP15586 552 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 BMP6P22004 513 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 MAPK8P45983 427 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 NNTQ13423 1086 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 UAP1L1Q3KQV9 507 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 KLHL10Q6JEL2 608 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 AHI1Q8N157 1196 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 HDDC3Q8N4P3 179 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 TRIML1Q8N9V2 468 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 CADM4Q8NFZ8 388 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 TFAP2BQ92481 460 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 NDRG1Q92597 394 aaKnown RBP13.84□□□□□ -0.19
APOC1-209ENST00000592885 PRCCQ92733 491 aaPredicted RBP13.84□□□□□ -0.19
APOC1-209ENST00000592885 AZIN2Q96A70 460 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 TRIM62Q9BVG3 475 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 CIPCQ9C0C6 399 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 PCED1AQ9H1Q7 454 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 ITM2CQ9NQX7 267 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 SFMBT1Q9UHJ3 866 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 CTNND2Q9UQB3 1225 aa13.84□□□□□ -0.19
APOC1-209ENST00000592885 CHD8Q9HCK8 2581 aa13.83□□□□□ -0.19
APOC1-209ENST00000592885 ARHGAP33O14559 1287 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 OPHN1O60890 802 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 AFPP02771 609 aaKnown RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 BRD2P25440 801 aaKnown RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 RPL34P49207 117 aaKnown RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 SLC11A2P49281 568 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 COPAP53621 1224 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 KCNH2Q12809 1159 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 SEMA3BQ13214 749 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 HNRNPDQ14103 355 aaKnown RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 ISM2Q6H9L7 571 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 PMF1Q6P1K2 205 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 SERPINA13PQ6UXR4 307 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 KIAA0907Q7Z7F0 614 aaPredicted RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 PIP4P1Q86T03 277 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 TMPRSS6Q8IU80 811 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 EHBP1Q8NDI1 1231 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 TMA16Q96EY4 203 aaKnown RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 SIPA1Q96FS4 1042 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 FAM81BQ96LP2 452 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 SERPINB11Q96P15 392 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 DDX50Q9BQ39 737 aaKnown RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 ZDHHC5Q9C0B5 715 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 MKRN2Q9H000 416 aaKnown RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 SLC6A17Q9H1V8 727 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 DNAAF2Q9NVR5 837 aaKnown RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 WSB2Q9NYS7 404 aaPredicted RBP13.83□□□□□ -0.2
APOC1-209ENST00000592885 CLEC4EQ9ULY5 219 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 CNTN6Q9UQ52 1028 aa13.83□□□□□ -0.2
APOC1-209ENST00000592885 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms