RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 NRDE2Q9H7Z3 1164 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 ZNF112Q9UJU3 913 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 G3BP2Q9UN86 482 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 MAP3K6O95382 1288 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 ITGB3P05106 788 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 SERPINE1P05121 402 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 UQCRBP14927 111 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 RPL10AP62906 217 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 SEMA5AQ13591 1074 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 CUL3Q13618 768 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 GRM2Q14416 872 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 CA9Q16790 459 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 SFT2D3Q587I9 215 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 N4BP2L1Q5TBK1 243 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 MAP1SQ66K74 1059 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 MAVSQ7Z434 540 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 ST13P4Q8IZP2 240 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 CCDC33Q8N5R6 958 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 NLRP4Q96MN2 994 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 KLHL4Q9C0H6 718 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 DCDC2Q9UHG0 476 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 TNFSF13BQ9Y275 285 aa15.32■□□□□ 0.04
SMARCA4-219ENST00000592604 ZBTB42B2RXF5 422 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 B4GALT5O43286 388 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 GRAP2O75791 330 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 EGFRP00533 1210 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 ALDOAP04075 364 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 PFKMP08237 780 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 GRK2P25098 689 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 IRX4P78413 519 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 NIPAL4Q0D2K0 466 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 MSLNQ13421 630 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 MED21Q13503 144 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 C16orf46Q6P387 395 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 DENND5BQ6ZUT9 1274 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 TMEM130Q8N3G9 435 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 LRRC71Q8N4P6 559 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 HAPLN3Q96S86 360 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 SORT1Q99523 831 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 ADAMTS6Q9UKP5 1117 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 KIAA1257Q9ULG3 409 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 LACTBL1A8MY62 500 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 ZNF195O14628 629 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 PABPC4LP0CB38 370 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 P4HA1P13674 534 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 GRIA1P42261 906 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 IDH3AP50213 366 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 ZNF280AP59817 542 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 INCA1Q0VD86 236 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 PDE1CQ14123 709 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 PCLAFQ15004 111 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 NBPF12Q5TAG4 269 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 POU5F2Q8N7G0 328 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 HOXC10Q9NYD6 342 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 CDH22Q9UJ99 828 aa15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 BARX2Q9UMQ3 279 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-219ENST00000592604 SPDYE16A6NNV3 312 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 PIK3R2O00459 728 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 MLNP12872 115 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 INSCQ1MX18 579 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 SLC5A9Q2M3M2 681 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 CDR2LQ86X02 465 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 LRRN4Q8WUT4 740 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 KHSRPQ92945 711 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 ATP2A3Q93084 1043 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 CMTM5Q96DZ9 223 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 FAM124BQ9H5Z6 455 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 VCX3AQ9NNX9 186 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 NGRNQ9NPE2 291 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 TSPAN16Q9UKR8 245 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 CASQ2O14958 399 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 PROCP04070 461 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 CYP2F1P24903 491 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 NR2C2P49116 596 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 SLC10A2Q12908 348 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 DCAF15Q66K64 600 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 JADE1Q6IE81 842 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 OLFML1Q6UWY5 402 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 METTL7BQ6UX53 244 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 ATG14Q6ZNE5 492 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 SLC26A7Q8TE54 656 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 BTBD7Q9P203 1132 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 COMMD3-BMI1R4GMX3 469 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 INO80B-WBP1J3KQ70 363 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 GPR25O00155 361 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 TPP1O14773 563 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 PEX1O43933 1283 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 PRKCGP05129 697 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 TGFB3P10600 412 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 VCLP18206 1134 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 EDNRBP24530 442 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 ADORA2AP29274 412 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 SDC4P31431 198 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 HARS2P49590 506 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 CFAP157Q5JU67 520 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 MAP3K21Q5TCX8 1036 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 LPCAT4Q643R3 524 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 PACS1Q6VY07 963 aa15.3■□□□□ 0.04
SMARCA4-219ENST00000592604 PPP4R1Q8TF05 950 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms