RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 XPO6Q96QU8 1125 aaKnown RBP15.7■□□□□ 0.1
ERCC1-214ENST00000592083 CDK5RAP1Q96SZ6 601 aaKnown RBP15.7■□□□□ 0.1
ERCC1-214ENST00000592083 CRACR2AQ9BSW2 395 aa15.7■□□□□ 0.1
ERCC1-214ENST00000592083 MARK1Q9P0L2 795 aa15.7■□□□□ 0.1
ERCC1-214ENST00000592083 BCCIPQ9P287 314 aaKnown RBP eCLIP15.7■□□□□ 0.1
ERCC1-214ENST00000592083 WDR35Q9P2L0 1181 aa15.7■□□□□ 0.1
ERCC1-214ENST00000592083 PILRBQ9UKJ0 227 aa15.7■□□□□ 0.1
ERCC1-214ENST00000592083 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.7■□□□□ 0.1
ERCC1-214ENST00000592083 GPSM3Q9Y4H4 160 aa15.7■□□□□ 0.1
ERCC1-214ENST00000592083 ITPR1Q14643 2758 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 M0QYV0 167 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 CACNG3O60359 315 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 FGFR1OPO95684 399 aaKnown RBP15.69■□□□□ 0.1
ERCC1-214ENST00000592083 SETSIPP0DME0 302 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 SCAPQ12770 1279 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 CNGA2Q16280 664 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 EOGTQ5NDL2 527 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 BSPRYQ5W0U4 402 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 GJB7Q6PEY0 223 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 ZNF513Q8N8E2 541 aaPredicted RBP15.69■□□□□ 0.1
ERCC1-214ENST00000592083 KCTD13Q8WZ19 329 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 ACOX2Q99424 681 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 UBE2TQ9NPD8 197 aaPredicted RBP15.69■□□□□ 0.1
ERCC1-214ENST00000592083 SFMBT1Q9UHJ3 866 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 AGO1Q9UL18 857 aaKnown RBP15.69■□□□□ 0.1
ERCC1-214ENST00000592083 STRIP2Q9ULQ0 834 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 SLC6A14Q9UN76 642 aa15.69■□□□□ 0.1
ERCC1-214ENST00000592083 PLXND1Q9Y4D7 1925 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 UPK3BL1B0FP48 263 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 PRRT4C9JH25 899 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 UPK3BL2E5RIL1 263 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 CISD3P0C7P0 127 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 KRT5P13647 590 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 CD59P13987 128 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 DGKGP49619 791 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 ZNF132P52740 706 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 ATXN3P54252 364 aaPredicted RBP15.68■□□□□ 0.1
ERCC1-214ENST00000592083 APBA1Q02410 837 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 GCNT1Q02742 428 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 COL28A1Q2UY09 1125 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 LYSMD4Q5XG99 296 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 EGFLAMQ63HQ2 1017 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 RAB44Q7Z6P3 723 aaPredicted RBP15.68■□□□□ 0.1
ERCC1-214ENST00000592083 PDZD3Q86UT5 571 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 IRF2BP1Q8IU81 584 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 FMNL3Q8IVF7 1028 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 HDDC3Q8N4P3 179 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 PNPLA1Q8N8W4 532 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 CLEC4CQ8WTT0 213 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 RNF139Q8WU17 664 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 SLC35F5Q8WV83 523 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 CLSTN2Q9H4D0 955 aa15.68■□□□□ 0.1
ERCC1-214ENST00000592083 TCRBV21S2A2A0A5A6 115 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 H0Y626 953 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 MSI1O43347 362 aaKnown RBP15.67■□□□□ 0.1
ERCC1-214ENST00000592083 OPHN1O60890 802 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 TRIM16O95361 564 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 SLC9A1P19634 815 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 RDXP35241 583 aaKnown RBP15.67■□□□□ 0.1
ERCC1-214ENST00000592083 DAOAP59103 153 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 GFPT1Q06210 699 aaPredicted RBP15.67■□□□□ 0.1
ERCC1-214ENST00000592083 DUOXA1Q1HG43 343 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 HSF5Q4G112 596 aaPredicted RBP15.67■□□□□ 0.1
ERCC1-214ENST00000592083 PREPLQ4J6C6 727 aaPredicted RBP15.67■□□□□ 0.1
ERCC1-214ENST00000592083 NUDT18Q6ZVK8 323 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 SPACA7Q96KW9 195 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 DCLK3Q9C098 648 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 MIS12Q9H081 205 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 POLMQ9NP87 494 aaPredicted RBP15.67■□□□□ 0.1
ERCC1-214ENST00000592083 ACP6Q9NPH0 428 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 ZNF510Q9Y2H8 683 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 FREM2Q5SZK8 3169 aa15.67■□□□□ 0.1
ERCC1-214ENST00000592083 PCDH15Q96QU1 1955 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 SH3BP5O60239 455 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 TSPAN3O60637 253 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 PENKP01210 267 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-214ENST00000592083 CHKAP35790 457 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 ANP32AP39687 249 aaKnown RBP15.66■□□□□ 0.1
ERCC1-214ENST00000592083 TRIP4Q15650 581 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-214ENST00000592083 FYB2Q5VWT5 728 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 PEAR1Q5VY43 1037 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-214ENST00000592083 DENND1BQ6P3S1 775 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 MINDY1Q8N5J2 469 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 MLKLQ8NB16 471 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 HNRNPLLQ8WVV9 542 aaKnown RBP15.66■□□□□ 0.1
ERCC1-214ENST00000592083 PLD4Q96BZ4 506 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 CAPN10Q9HC96 672 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 CNGB3Q9NQW8 809 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 ABCC13Q9NSE7 274 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 OLA1Q9NTK5 396 aaKnown RBP15.66■□□□□ 0.1
ERCC1-214ENST00000592083 CLEC4EQ9ULY5 219 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 STARD13Q9Y3M8 1113 aa15.66■□□□□ 0.1
ERCC1-214ENST00000592083 LETM1O95202 739 aaPredicted RBP15.65■□□□□ 0.1
ERCC1-214ENST00000592083 SERPINF2P08697 491 aa15.65■□□□□ 0.1
ERCC1-214ENST00000592083 HOXB2P14652 356 aa15.65■□□□□ 0.1
ERCC1-214ENST00000592083 NTSR1P30989 418 aa15.65■□□□□ 0.1
ERCC1-214ENST00000592083 USP8P40818 1118 aa15.65■□□□□ 0.1
ERCC1-214ENST00000592083 MTIF2P46199 727 aaKnown RBP15.65■□□□□ 0.1
ERCC1-214ENST00000592083 RPL6Q02878 288 aaKnown RBP15.65■□□□□ 0.1
ERCC1-214ENST00000592083 STILQ15468 1287 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms