RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CDH5P33151 784 aaPredicted RBP28.33■■■□□ 2.13
SMAD4-213ENST00000591914 SNX16P57768 344 aa28.33■■■□□ 2.13
SMAD4-213ENST00000591914 PTPN20Q4JDL3 420 aa28.33■■■□□ 2.13
SMAD4-213ENST00000591914 ANO6Q4KMQ2 910 aa28.33■■■□□ 2.13
SMAD4-213ENST00000591914 FAM133BQ5BKY9 247 aaKnown RBP28.33■■■□□ 2.13
SMAD4-213ENST00000591914 MDGA1Q8NFP4 955 aa28.33■■■□□ 2.13
SMAD4-213ENST00000591914 ADAM32Q8TC27 787 aa28.33■■■□□ 2.13
SMAD4-213ENST00000591914 SLC2A13Q96QE2 648 aa28.33■■■□□ 2.13
SMAD4-213ENST00000591914 BPIFA3Q9BQP9 254 aa28.33■■■□□ 2.13
SMAD4-213ENST00000591914 IRX2Q9BZI1 471 aaPredicted RBP28.33■■■□□ 2.13
SMAD4-213ENST00000591914 POLMQ9NP87 494 aaPredicted RBP28.33■■■□□ 2.13
SMAD4-213ENST00000591914 DAAM1Q9Y4D1 1078 aa28.33■■■□□ 2.13
SMAD4-213ENST00000591914 EPHB6O15197 1021 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 ACSL4O60488 711 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 TSPAN3O60637 253 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 RETP07949 1114 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 GEN1Q17RS7 908 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 EFHC1Q5JVL4 640 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 OLFML1Q6UWY5 402 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 FAM183BPQ6ZVS7 135 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 CACNA2D4Q7Z3S7 1137 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.32■■■□□ 2.12
SMAD4-213ENST00000591914 FAM160A2Q8N612 972 aaPredicted RBP28.32■■■□□ 2.12
SMAD4-213ENST00000591914 TMEM35BQ8NCS4 154 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 TMA16Q96EY4 203 aaKnown RBP28.32■■■□□ 2.12
SMAD4-213ENST00000591914 ACOX2Q99424 681 aa28.32■■■□□ 2.12
SMAD4-213ENST00000591914 IRAK2O43187 625 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 HSF2BPO75031 334 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 ALDH1A2O94788 518 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 CDK11BP21127 795 aaKnown RBP28.31■■■□□ 2.12
SMAD4-213ENST00000591914 JAM2P57087 298 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 POLR2FP61218 127 aaKnown RBP28.31■■■□□ 2.12
SMAD4-213ENST00000591914 EIF4EBP2Q13542 120 aaPredicted RBP28.31■■■□□ 2.12
SMAD4-213ENST00000591914 SYCP1Q15431 976 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 RNF43Q68DV7 783 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 NOP9Q86U38 636 aaKnown RBP28.31■■■□□ 2.12
SMAD4-213ENST00000591914 KIAA2013Q8IYS2 634 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 EPS8L1Q8TE68 723 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 IPO4Q8TEX9 1081 aaKnown RBP28.31■■■□□ 2.12
SMAD4-213ENST00000591914 ZC3H10Q96K80 434 aaKnown RBP28.31■■■□□ 2.12
SMAD4-213ENST00000591914 TPSD1Q9BZJ3 242 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 DMXL1Q9Y485 3027 aa28.31■■■□□ 2.12
SMAD4-213ENST00000591914 SPAG17Q6Q759 2223 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 TRUB2O95900 331 aaKnown RBP28.3■■■□□ 2.12
SMAD4-213ENST00000591914 SLC6A4P31645 630 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 PITX1P78337 314 aaPredicted RBP28.3■■■□□ 2.12
SMAD4-213ENST00000591914 DCAF6Q58WW2 860 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 MPP7Q5T2T1 576 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 PIK3R6Q5UE93 754 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 NADSYN1Q6IA69 706 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 RFWD3Q6PCD5 774 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 ANKS1BQ7Z6G8 1248 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 KBTBD6Q86V97 674 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 CHPFQ8IZ52 775 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 OLIG1Q8TAK6 271 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 GABRG3Q99928 467 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 PDCL3Q9H2J4 239 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 SYNCQ9H7C4 482 aa28.3■■■□□ 2.12
SMAD4-213ENST00000591914 GOLGA6L7A0A1B0GV03 622 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 A0A1W2PQF6 199 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 LSM8O95777 96 aaKnown RBP28.29■■■□□ 2.12
SMAD4-213ENST00000591914 ATP1A3P13637 1013 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 HOXB2P14652 356 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 TGM1P22735 817 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 SGSHP51688 502 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 UBXN1Q04323 297 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 KLHL40Q2TBA0 621 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 TAF3Q5VWG9 929 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 OR6B2Q6IFH4 312 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 SLC26A9Q7LBE3 791 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 ZDHHC17Q8IUH5 632 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 DEFB106AQ8N104 65 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 GPR161Q8N6U8 529 aaKnown RBP28.29■■■□□ 2.12
SMAD4-213ENST00000591914 ERGIC2Q96RQ1 377 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 CD248Q9HCU0 757 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 NLRC4Q9NPP4 1024 aa28.29■■■□□ 2.12
SMAD4-213ENST00000591914 NOCTQ9UK39 431 aaKnown RBP28.29■■■□□ 2.12
SMAD4-213ENST00000591914 TCRBV21S2A2A0A5A6 115 aa28.28■■■□□ 2.12
SMAD4-213ENST00000591914 GFPT2O94808 682 aa28.28■■■□□ 2.12
SMAD4-213ENST00000591914 SOX5P35711 763 aa28.28■■■□□ 2.12
SMAD4-213ENST00000591914 WASP42768 502 aa28.28■■■□□ 2.12
SMAD4-213ENST00000591914 GABRB2P47870 512 aa28.28■■■□□ 2.12
SMAD4-213ENST00000591914 SLC6A3Q01959 620 aa28.28■■■□□ 2.12
SMAD4-213ENST00000591914 EIF4HQ15056 248 aaKnown RBP28.28■■■□□ 2.12
SMAD4-213ENST00000591914 USP39Q53GS9 565 aaKnown RBP28.28■■■□□ 2.12
SMAD4-213ENST00000591914 SDE2Q6IQ49 451 aa28.28■■■□□ 2.12
SMAD4-213ENST00000591914 DHX40Q8IX18 779 aaKnown RBP28.28■■■□□ 2.12
SMAD4-213ENST00000591914 ZNF397Q8NF99 534 aaPredicted RBP28.28■■■□□ 2.12
SMAD4-213ENST00000591914 LOXL4Q96JB6 756 aa28.28■■■□□ 2.12
SMAD4-213ENST00000591914 DDX50Q9BQ39 737 aaKnown RBP28.28■■■□□ 2.12
SMAD4-213ENST00000591914 FUCA2Q9BTY2 467 aa28.28■■■□□ 2.12
SMAD4-213ENST00000591914 DCLK1O15075 740 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 NPC1O15118 1278 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 LRP3O75074 770 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 GRAP2O75791 330 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 APOEP02649 317 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 MMEP08473 750 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 HLA-FP30511 346 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 CDK17Q00537 523 aa28.27■■■□□ 2.12
SMAD4-213ENST00000591914 PLK5Q496M5 336 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms