RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 TMEM215Q68D42 235 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 UBR7Q8N806 425 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 RBBP8NLQ8NC74 664 aaPredicted RBP22.74■■□□□ 1.23
DDX39A-215ENST00000590696 SORCS1Q8WY21 1168 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 SLC35C1Q96A29 364 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 SIPA1Q96FS4 1042 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 GPR174Q9BXC1 333 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 TMEM121BQ9BXQ6 578 aaPredicted RBP22.74■■□□□ 1.23
DDX39A-215ENST00000590696 DNAAF2Q9NVR5 837 aaKnown RBP22.74■■□□□ 1.23
DDX39A-215ENST00000590696 HBS1LQ9Y450 684 aaKnown RBP22.74■■□□□ 1.23
DDX39A-215ENST00000590696 GOLGA6L4A6NEF3 574 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 YJEFN3A6XGL0 299 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 E7ENQ6 273 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 SMC2O95347 1197 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 CD59P13987 128 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 PRKCHP24723 683 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 LRRC63Q05C16 580 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 SIX6OS1Q8N1H7 587 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 ENGASEQ8NFI3 743 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 SPATA20Q8TB22 786 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 KCTD13Q8WZ19 329 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 PRCCQ92733 491 aaPredicted RBP22.73■■□□□ 1.23
DDX39A-215ENST00000590696 SMARCE1Q969G3 411 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 KIAA1257Q9ULG3 409 aa22.73■■□□□ 1.23
DDX39A-215ENST00000590696 MEI4A8MW99 385 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 O00370 1275 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 TIMM44O43615 452 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 HYAL3O43820 417 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-215ENST00000590696 EPHX1P07099 455 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 SETSIPP0DME0 302 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 NCAM1P13591 858 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 TBXAS1P24557 533 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-215ENST00000590696 HOXD9P28356 352 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-215ENST00000590696 TPMTP51580 245 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 COPAP53621 1224 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 ARID5AQ03989 594 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 SERPINA13PQ6UXR4 307 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 ABCC13Q9NSE7 274 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 ZMIZ1Q9ULJ6 1067 aa22.72■■□□□ 1.23
DDX39A-215ENST00000590696 ACADMP11310 421 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 LCP1P13796 627 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 OXTRP30559 389 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 FAM193AP78312 1265 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 PKDCCQ504Y2 493 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 CACUL1Q86Y37 369 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 KDF1Q8NAX2 398 aaPredicted RBP22.71■■□□□ 1.23
DDX39A-215ENST00000590696 CADM4Q8NFZ8 388 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 DNASE2BQ8WZ79 361 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 GATA6Q92908 595 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 TMA16Q96EY4 203 aaKnown RBP22.71■■□□□ 1.23
DDX39A-215ENST00000590696 CNGB3Q9NQW8 809 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 STOML2Q9UJZ1 356 aa22.71■■□□□ 1.23
DDX39A-215ENST00000590696 PCNX2A6NKB5 2137 aa22.7■■□□□ 1.23
DDX39A-215ENST00000590696 CFAP47Q6ZTR5 3102 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 MSI1O43347 362 aaKnown RBP22.7■■□□□ 1.22
DDX39A-215ENST00000590696 GJB3O75712 270 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 HLA-FP30511 346 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 FMO5P49326 533 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 DAOAP59103 153 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 SLC14A1Q13336 389 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 DCAF12L1Q5VU92 463 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 TMEM270Q6UE05 265 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 LCLAT1Q6UWP7 414 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 SCML4Q8N228 414 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 TFAP2BQ92481 460 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 GTPBP4Q9BZE4 634 aaKnown RBP22.7■■□□□ 1.22
DDX39A-215ENST00000590696 MIR1-1HGQ9H1L0 117 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 METTL14Q9HCE5 456 aaKnown RBP22.7■■□□□ 1.22
DDX39A-215ENST00000590696 NFE2L3Q9Y4A8 694 aa22.7■■□□□ 1.22
DDX39A-215ENST00000590696 A0A1B0GTW7 788 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 PIK3R2O00459 728 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 SH3BP5O60239 455 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 LATS1O95835 1130 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 PAEPP09466 180 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 HLA-EP13747 358 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 RGS7P49802 495 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 ZNF445P59923 1031 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 GRIK2Q13002 908 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 ADGRF1Q5T601 910 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 ISM2Q6H9L7 571 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 ZCCHC9Q8N567 271 aaKnown RBP22.69■■□□□ 1.22
DDX39A-215ENST00000590696 SLC35F5Q8WV83 523 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 CAMK1GQ96NX5 476 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 NT5C1BQ96P26 610 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 NUP58Q9BVL2 599 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 NEUROG3Q9Y4Z2 214 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 PCDHB4Q9Y5E5 795 aa22.69■■□□□ 1.22
DDX39A-215ENST00000590696 METTL12A8MUP2 240 aa22.68■■□□□ 1.22
DDX39A-215ENST00000590696 RNF225M0QZC1 329 aaPredicted RBP22.68■■□□□ 1.22
DDX39A-215ENST00000590696 PSMA7O14818 248 aa22.68■■□□□ 1.22
DDX39A-215ENST00000590696 GABBR2O75899 941 aa22.68■■□□□ 1.22
DDX39A-215ENST00000590696 IGLV3-19P01714 112 aa22.68■■□□□ 1.22
DDX39A-215ENST00000590696 RDXP35241 583 aaKnown RBP22.68■■□□□ 1.22
DDX39A-215ENST00000590696 STIM1Q13586 685 aa22.68■■□□□ 1.22
DDX39A-215ENST00000590696 HNRNPDQ14103 355 aaKnown RBP22.68■■□□□ 1.22
DDX39A-215ENST00000590696 FNDC3BQ53EP0 1204 aaKnown RBP22.68■■□□□ 1.22
DDX39A-215ENST00000590696 PMF1Q6P1K2 205 aa22.68■■□□□ 1.22
DDX39A-215ENST00000590696 CHST9Q7L1S5 443 aa22.68■■□□□ 1.22
DDX39A-215ENST00000590696 FAM124AQ86V42 546 aa22.68■■□□□ 1.22
DDX39A-215ENST00000590696 OR2T3Q8NH03 318 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms