RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-208	ENST00000590301	AZIN2	Q96A70	460 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	PIWIL1	Q96J94	861 aa	Known RBP	7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	MRGPRX1	Q96LB2	322 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	ACOX2	Q99424	681 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	DDX50	Q9BQ39	737 aa	Known RBP	7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	SMOC1	Q9H4F8	434 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	FBRS	Q9HAH7	460 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	RXFP3	Q9NSD7	469 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	ELOVL2	Q9NXB9	296 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	CACNA2D2	Q9NY47	1150 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	PLK2	Q9NYY3	685 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	THAP10	Q9P2Z0	257 aa	Predicted RBP	7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	SUSD2	Q9UGT4	822 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	MBD1	Q9UIS9	605 aa	Predicted RBP	7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	RWDD2A	Q9UIY3	292 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	PILRB	Q9UKJ0	227 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	CTNND2	Q9UQB3	1225 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	NFE2L3	Q9Y4A8	694 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	STON1	Q9Y6Q2	735 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	ACACB	O00763	2458 aa		7.93	□□□□□ -1.14
NPC1-208	ENST00000590301	IGHV1OR15-9	A0A0B4J2B8	117 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	TYW5	A2RUC4	315 aa	Known RBP	7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	GTPBP10	A4D1E9	387 aa	Known RBP	7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	C4orf47	A7E2U8	309 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	UPK3BL1	B0FP48	263 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	UPK3BL2	E5RIL1	263 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	BIN1	O00499	593 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	KCNK5	O95279	499 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	IGLV3-27	P01718	113 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	LTF	P02788	710 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	SERPINF2	P08697	491 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	CEACAM1	P13688	526 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	LCP1	P13796	627 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	OXTR	P30559	389 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	WAS	P42768	502 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	RPL34	P49207	117 aa	Known RBP	7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	SHC2	P98077	582 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	ARID5A	Q03989	594 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	GFPT1	Q06210	699 aa	Predicted RBP	7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	GEN1	Q17RS7	908 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	DUOXA1	Q1HG43	343 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	FUT11	Q495W5	492 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	TRIM61	Q5EBN2	209 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	WDR45B	Q5MNZ6	344 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	ISM2	Q6H9L7	571 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	PMF1	Q6P1K2	205 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	MLKL	Q8NB16	471 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	CADM4	Q8NFZ8	388 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	EDEM1	Q92611	657 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	TMA16	Q96EY4	203 aa	Known RBP	7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	SERPINB11	Q96P15	392 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	SRRT	Q9BXP5	876 aa	Known RBP	7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	INTS2	Q9H0H0	1204 aa	Known RBP	7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	PCED1A	Q9H1Q7	454 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	OCEL1	Q9H607	264 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	PRDM16	Q9HAZ2	1276 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	ZDHHC4	Q9NPG8	344 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	ITM2C	Q9NQX7	267 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	KIAA1468	Q9P260	1216 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	ANGPTL2	Q9UKU9	493 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	SLC6A14	Q9UN76	642 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	PLA2G4C	Q9UP65	541 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	CHD8	Q9HCK8	2581 aa		7.92	□□□□□ -1.14
NPC1-208	ENST00000590301	RNF225	M0QZC1	329 aa	Predicted RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	CDX4	O14627	284 aa	Predicted RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	GADD45B	O75293	160 aa	Predicted RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	NDUFS2	O75306	463 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	IGLV3-19	P01714	112 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	CFI	P05156	583 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	ATP5B	P06576	529 aa	Known RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	SYP	P08247	313 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	NCAM1	P13591	858 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	KRT5	P13647	590 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	GNS	P15586	552 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	FECH	P22830	423 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	ITPKA	P23677	461 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	BRD2	P25440	801 aa	Known RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	HOXD9	P28356	352 aa	Predicted RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	PML	P29590	882 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	CD6	P30203	668 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	GPD2	P43304	727 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	RGS7	P49802	495 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	NOVA1	P51513	510 aa	Known RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	ATXN3	P54252	364 aa	Predicted RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	TBX4	P57082	545 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	IRX4	P78413	519 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	ZBTB16	Q05516	673 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	ZNF33A	Q06730	810 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	MTA1	Q13330	715 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	ZNF234	Q14588	700 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	KIAA1211L	Q6NV74	962 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	KIAA1324	Q6UXG2	1013 aa	Known RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	SERPINA13P	Q6UXR4	307 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	ARMCX6	Q7L4S7	300 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	RRAGA	Q7L523	313 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	ARHGEF19	Q8IW93	802 aa		7.91	□□□□□ -1.14
NPC1-208	ENST00000590301	CCDC117	Q8IWD4	279 aa	Predicted RBP	7.91	□□□□□ -1.14

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