RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 R4GN57 208 aa16.7■□□□□ 0.26
RETREG3-206ENST00000588423 APOEP02649 317 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 SLC2A3P11169 496 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
RETREG3-206ENST00000588423 GBP1P32455 592 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 MATKP42679 507 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 MRE11P49959 708 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 DMC1Q14565 340 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 C2orf27AQ580R0 203 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 FAM133BQ5BKY9 247 aaKnown RBP16.69■□□□□ 0.26
RETREG3-206ENST00000588423 FIGNQ5HY92 759 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 C10orf76Q5T2E6 689 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 NAA35Q5VZE5 725 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 RNF43Q68DV7 783 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 ARCQ7LC44 396 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 TRMT11Q7Z4G4 463 aaKnown RBP16.69■□□□□ 0.26
RETREG3-206ENST00000588423 WDR5BQ86VZ2 330 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 LONP2Q86WA8 852 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 SFTPA1Q8IWL2 248 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 IL17RCQ8NAC3 791 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 ADAM32Q8TC27 787 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 DDI1Q8WTU0 396 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 CPA5Q8WXQ8 436 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 BAP1Q92560 729 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 NKD2Q969F2 451 aaPredicted RBP16.69■□□□□ 0.26
RETREG3-206ENST00000588423 TMA16Q96EY4 203 aaKnown RBP16.69■□□□□ 0.26
RETREG3-206ENST00000588423 EDEM3Q9BZQ6 932 aa16.69■□□□□ 0.26
RETREG3-206ENST00000588423 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.69■□□□□ 0.26
RETREG3-206ENST00000588423 TRIM24O15164 1050 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 GRAP2O75791 330 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 UNGP13051 313 aaPredicted RBP16.68■□□□□ 0.26
RETREG3-206ENST00000588423 MMP8P22894 467 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 HOXD9P28356 352 aaPredicted RBP16.68■□□□□ 0.26
RETREG3-206ENST00000588423 CNR2P34972 360 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 NFKBIBQ15653 356 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 PIK3R6Q5UE93 754 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 ZNF557Q8N988 423 aaPredicted RBP16.68■□□□□ 0.26
RETREG3-206ENST00000588423 BHMTQ93088 406 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 BTN2A3PQ96KV6 586 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 TTYH3Q9C0H2 523 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 SLC12A6Q9UHW9 1150 aa16.68■□□□□ 0.26
RETREG3-206ENST00000588423 CCR1P32246 355 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 TIE1P35590 1138 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 GSCP56915 257 aaPredicted RBP16.67■□□□□ 0.26
RETREG3-206ENST00000588423 UBASH3AP57075 661 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 PITX1P78337 314 aaPredicted RBP16.67■□□□□ 0.26
RETREG3-206ENST00000588423 CENPCQ03188 943 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 ARID5AQ03989 594 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 E2F5Q15329 346 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 EOGTQ5NDL2 527 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 FAM102AQ5T9C2 384 aaPredicted RBP16.67■□□□□ 0.26
RETREG3-206ENST00000588423 NADSYN1Q6IA69 706 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 LRSAM1Q6UWE0 723 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 IRF2BP2Q7Z5L9 587 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 ALYREFQ86V81 257 aaKnown RBP16.67■□□□□ 0.26
RETREG3-206ENST00000588423 ALLCQ8N6M5 410 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 ZNF513Q8N8E2 541 aaPredicted RBP16.67■□□□□ 0.26
RETREG3-206ENST00000588423 ATP6V0D2Q8N8Y2 350 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 NT5C3BQ969T7 300 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 PGAP3Q96FM1 320 aaPredicted RBP16.67■□□□□ 0.26
RETREG3-206ENST00000588423 NPY6RQ99463 290 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 AGPAT1Q99943 283 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 NUP58Q9BVL2 599 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 EPC1Q9H2F5 836 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 FAM204AQ9H8W3 233 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 DDIT4Q9NX09 232 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.67■□□□□ 0.26
RETREG3-206ENST00000588423 AIPL1Q9NZN9 384 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 EBF1Q9UH73 591 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 TMEM59LQ9UK28 342 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 STAP1Q9ULZ2 295 aa16.67■□□□□ 0.26
RETREG3-206ENST00000588423 CACNA1IQ9P0X4 2223 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 TYW5A2RUC4 315 aaKnown RBP16.66■□□□□ 0.26
RETREG3-206ENST00000588423 PRR23AA6NEV1 266 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 ANTXRLA6NF34 631 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 LRRC53A6NM62 1247 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 KCNU1A8MYU2 1149 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 PRRT4C9JH25 899 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 NPC1O15118 1278 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 TSPAN3O60637 253 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 KLF8O95600 359 aaPredicted RBP16.66■□□□□ 0.26
RETREG3-206ENST00000588423 APBB3O95704 486 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 LMNAP02545 664 aaKnown RBP16.66■□□□□ 0.26
RETREG3-206ENST00000588423 HNRNPLP14866 589 aaKnown RBP eCLIP16.66■□□□□ 0.26
RETREG3-206ENST00000588423 ABCB4P21439 1286 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 SLC6A4P31645 630 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 PBX1P40424 430 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 NSFP46459 744 aaKnown RBP16.66■□□□□ 0.26
RETREG3-206ENST00000588423 FNTBP49356 437 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 DGKEP52429 567 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 DMWDQ09019 674 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 EIF4HQ15056 248 aaKnown RBP16.66■□□□□ 0.26
RETREG3-206ENST00000588423 CRY1Q16526 586 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 CLEC16AQ2KHT3 1053 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 ZC3H12AQ5D1E8 599 aaKnown RBP16.66■□□□□ 0.26
RETREG3-206ENST00000588423 EMC10Q5UCC4 262 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 ANKS1BQ7Z6G8 1248 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 PHF13Q86YI8 300 aaPredicted RBP16.66■□□□□ 0.26
RETREG3-206ENST00000588423 FANCMQ8IYD8 2048 aa16.66■□□□□ 0.26
RETREG3-206ENST00000588423 TXNDC5Q8NBS9 432 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms