RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 OGDHQ02218 1023 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 TRPC3Q13507 836 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 MRPL58Q14197 206 aaKnown RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 PIGHQ14442 188 aaPredicted RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 COL19A1Q14993 1142 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 SKIV2LQ15477 1246 aaKnown RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 TFDP3Q5H9I0 405 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 VARS2Q5ST30 1063 aaKnown RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 PRSS55Q6UWB4 352 aaPredicted RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 EFHBQ8N7U6 833 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 TMEM35BQ8NCS4 154 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 PABPC5Q96DU9 382 aaKnown RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 PITPNM3Q9BZ71 974 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 TRABDQ9H4I3 376 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 SLC24A2Q9UI40 661 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 BACE2Q9Y5Z0 518 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 COL6A3P12111 3177 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 H7C4K7 107 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 ALOX15BO15296 676 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 CLASP2O75122 1294 aaKnown RBP15.17■□□□□ 0.02
CCDC43-203ENST00000588210 C1RP00736 705 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 CDKN2BP42772 138 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 NDUFV1P49821 464 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 YWHAHQ04917 246 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-203ENST00000588210 ADCY1Q08828 1119 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 SPARCL1Q14515 664 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 FASTKD3Q14CZ7 662 aaKnown RBP15.17■□□□□ 0.02
CCDC43-203ENST00000588210 CTC1Q2NKJ3 1217 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 ZFYVE27Q5T4F4 411 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 SCARA3Q6AZY7 606 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 CENPUQ71F23 418 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 HPDLQ96IR7 371 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 NIF3L1Q9GZT8 377 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 CXorf56Q9H5V9 222 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 EBF2Q9HAK2 575 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 GDAP2Q9NXN4 497 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 MTRRQ9UBK8 725 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 DSEQ9UL01 958 aa15.17■□□□□ 0.02
CCDC43-203ENST00000588210 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-203ENST00000588210 F8VP50 259 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 CYB561D2O14569 222 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 OAZ2O95190 189 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 STAU1O95793 577 aaKnown RBP15.16■□□□□ 0.02
CCDC43-203ENST00000588210 CYP11A1P05108 521 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 ETS1P14921 441 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 ATICP31939 592 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 ELF1P32519 619 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 ADAM15Q13444 863 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 KCNC3Q14003 757 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 TLDC1Q6P9B6 456 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 DCUN1D2Q6PH85 259 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 POLNQ7Z5Q5 900 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 SLC35B2Q8TB61 432 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 FBF1Q8TES7 1133 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 PRCCQ92733 491 aaPredicted RBP15.16■□□□□ 0.02
CCDC43-203ENST00000588210 CLSTN3Q9BQT9 956 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 OXCT2Q9BYC2 517 aaPredicted RBP15.16■□□□□ 0.02
CCDC43-203ENST00000588210 FETUBQ9UGM5 382 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 PCDHGC3Q9UN70 934 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 REV3LO60673 3130 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 SPAG7O75391 227 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 KRT16P08779 473 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 SRGAP2BP0DMP2 458 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 BRD2P25440 801 aaKnown RBP15.16■□□□□ 0.02
CCDC43-203ENST00000588210 PDK4Q16654 411 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 WDR72Q3MJ13 1102 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 ZNF280DQ6N043 979 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 TMEM184AQ6ZMB5 413 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 DPH6Q7L8W6 267 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 HLA-CQ95604 372 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 SMC6Q96SB8 1091 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 FRMD8P1Q9BZ68 369 aaPredicted RBP15.16■□□□□ 0.02
CCDC43-203ENST00000588210 SSU72Q9NP77 194 aaKnown RBP15.16■□□□□ 0.02
CCDC43-203ENST00000588210 CLDND1Q9NY35 253 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 EFR3BQ9Y2G0 817 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 FARP1Q9Y4F1 1045 aaPredicted RBP15.16■□□□□ 0.02
CCDC43-203ENST00000588210 TIMM13Q9Y5L4 95 aaPredicted RBP15.16■□□□□ 0.02
CCDC43-203ENST00000588210 HCFC2Q9Y5Z7 792 aa15.16■□□□□ 0.02
CCDC43-203ENST00000588210 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-203ENST00000588210 LRRD1A4D1F6 860 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 POC1B-GALNT4F8VUJ3 575 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 TBC1D4O60343 1298 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 HUS1O60921 280 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 UNC5CO95185 931 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 CLCN4P51793 760 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 EFHC2Q5JST6 749 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 TXNRD3NBQ6F5E7 133 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 OVOS1Q6IE37 1185 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 FAM47EQ6ZV65 393 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 PCGF5Q86SE9 256 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 METTL23Q86XA0 190 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 ZBED8Q8IZ13 594 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 TBC1D31Q96DN5 1066 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 VRTNQ9H8Y1 702 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 VPS37BQ9H9H4 285 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 CISHQ9NSE2 258 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 TXLNGQ9NUQ3 528 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 PSMC3IPQ9P2W1 217 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-203ENST00000588210 SNX9Q9Y5X1 595 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms