RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 CFIP05156 583 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 BRD2P25440 801 aaKnown RBP19.61■□□□□ 0.73
TRIM47-205ENST00000587774 HOXD9P28356 352 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-205ENST00000587774 HARS2P49590 506 aaKnown RBP19.61■□□□□ 0.73
TRIM47-205ENST00000587774 RGS7P49802 495 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 ENPP2Q13822 863 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 MORC3Q14149 939 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 STARD3Q14849 445 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 UAP1L1Q3KQV9 507 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 SH3PXD2AQ5TCZ1 1133 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 ARHGEF19Q8IW93 802 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 HSPA12BQ96MM6 686 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 ABCC13Q9NSE7 274 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 THAP10Q9P2Z0 257 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-205ENST00000587774 IGF2RP11717 2491 aa19.61■□□□□ 0.73
TRIM47-205ENST00000587774 BICDL2A1A5D9 508 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 NPC1O15118 1278 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 GADD45BO75293 160 aaPredicted RBP19.6■□□□□ 0.73
TRIM47-205ENST00000587774 SHC2P98077 582 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 ZNF252P-AS1Q0IIN9 211 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 ZNF234Q14588 700 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 EIF4HQ15056 248 aaKnown RBP19.6■□□□□ 0.73
TRIM47-205ENST00000587774 TMEM215Q68D42 235 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 PMF1Q6P1K2 205 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 FOXR2Q6PJQ5 311 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 RRAGAQ7L523 313 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 SCML4Q8N228 414 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 RBBP8NLQ8NC74 664 aaPredicted RBP19.6■□□□□ 0.73
TRIM47-205ENST00000587774 SLC35F5Q8WV83 523 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 UCMAQ8WVF2 138 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 SORCS1Q8WY21 1168 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 SLC2A11Q9BYW1 496 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 CIPCQ9C0C6 399 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 MKRN2Q9H000 416 aaKnown RBP19.6■□□□□ 0.73
TRIM47-205ENST00000587774 DOCK9Q9BZ29 2069 aa19.6■□□□□ 0.73
TRIM47-205ENST00000587774 P4HA2O15460 535 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 TSPAN3O60637 253 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 PRKCHP24723 683 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 ZNF132P52740 706 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 STX17P56962 302 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 CETN1Q12798 172 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 DUOXA1Q1HG43 343 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 MPPE1Q53F39 396 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 MSANTD2Q6P1R3 559 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 TRIM59Q8IWR1 403 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 TRIML1Q8N9V2 468 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 CLEC4CQ8WTT0 213 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 PRDM16Q9HAZ2 1276 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 CAPN10Q9HC96 672 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 ELOVL2Q9NXB9 296 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 STOML2Q9UJZ1 356 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 KNL1Q8NG31 2342 aa19.59■□□□□ 0.73
TRIM47-205ENST00000587774 DOCK4Q8N1I0 1966 aa19.58■□□□□ 0.73
TRIM47-205ENST00000587774 LATS1O95835 1130 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 CSRP1P21291 193 aaKnown RBP19.58■□□□□ 0.72
TRIM47-205ENST00000587774 HLA-FP30511 346 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 SGSHP51688 502 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 GCNT1Q02742 428 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 KCNH2Q12809 1159 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 PAK1Q13153 545 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 STILQ15468 1287 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 CNGA2Q16280 664 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 CACUL1Q86Y37 369 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 CEP76Q8TAP6 659 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 IRGQQ8WZA9 623 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 KREMEN1Q96MU8 473 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 USP36Q9P275 1121 aaKnown RBP19.58■□□□□ 0.72
TRIM47-205ENST00000587774 SLC6A14Q9UN76 642 aa19.58■□□□□ 0.72
TRIM47-205ENST00000587774 NDUFS2O75306 463 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 IGLV3-27P01718 113 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 LTFP02788 710 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 SERPINF2P08697 491 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 CEACAM1P13688 526 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 COPAP53621 1224 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 MARSP56192 900 aaKnown RBP19.57■□□□□ 0.72
TRIM47-205ENST00000587774 ZNF445P59923 1031 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 ADGRF1Q5T601 910 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 SERPINA13PQ6UXR4 307 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 RABEPKQ7Z6M1 372 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 DEFB124Q8NES8 71 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 GTPBP2Q9BX10 602 aaKnown RBP19.57■□□□□ 0.72
TRIM47-205ENST00000587774 CHD6Q8TD26 2715 aa19.57■□□□□ 0.72
TRIM47-205ENST00000587774 KCNJ18B7U540 433 aa19.56■□□□□ 0.72
TRIM47-205ENST00000587774 SYNCRIPO60506 623 aaKnown RBP19.56■□□□□ 0.72
TRIM47-205ENST00000587774 AFPP02771 609 aaKnown RBP19.56■□□□□ 0.72
TRIM47-205ENST00000587774 NCAM1P13591 858 aa19.56■□□□□ 0.72
TRIM47-205ENST00000587774 CD6P30203 668 aa19.56■□□□□ 0.72
TRIM47-205ENST00000587774 ARID5AQ03989 594 aa19.56■□□□□ 0.72
TRIM47-205ENST00000587774 GFPT1Q06210 699 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-205ENST00000587774 ST3GAL2Q16842 350 aa19.56■□□□□ 0.72
TRIM47-205ENST00000587774 METTL3Q86U44 580 aaKnown RBP19.56■□□□□ 0.72
TRIM47-205ENST00000587774 TMPRSS6Q8IU80 811 aa19.56■□□□□ 0.72
TRIM47-205ENST00000587774 RGL4Q8IZJ4 473 aa19.56■□□□□ 0.72
TRIM47-205ENST00000587774 EHBP1Q8NDI1 1231 aa19.56■□□□□ 0.72
TRIM47-205ENST00000587774 TOE1Q96GM8 510 aaKnown RBP19.56■□□□□ 0.72
TRIM47-205ENST00000587774 ZNF419Q96HQ0 510 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-205ENST00000587774 MIS12Q9H081 205 aa19.56■□□□□ 0.72
TRIM47-205ENST00000587774 INTS2Q9H0H0 1204 aaKnown RBP19.56■□□□□ 0.72
TRIM47-205ENST00000587774 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRIM47-205ENST00000587774 CABIN1Q9Y6J0 2220 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 218.8 ms