RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TRIM50Q86XT4 487 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 ADGRF2Q8IZF7 708 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 SLC35F5Q8WV83 523 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 TFB1MQ8WVM0 346 aaKnown RBP19.16■□□□□ 0.66
DDX39A-206ENST00000587730 SPATA13Q96N96 652 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 PANX3Q96QZ0 392 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 PLEKHA5Q9HAU0 1116 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 PAPOLBQ9NRJ5 636 aaKnown RBP19.16■□□□□ 0.66
DDX39A-206ENST00000587730 ADAM28Q9UKQ2 775 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 SF3B1O75533 1304 aaKnown RBP eCLIP19.15■□□□□ 0.662e-7■■■■■ 68.9
DDX39A-206ENST00000587730 COL1A2P08123 1366 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 HMX2A2RU54 273 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 FZD9O00144 591 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 CCNT2O60583 730 aaKnown RBP19.15■□□□□ 0.66
DDX39A-206ENST00000587730 METTL18O95568 372 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 MX2P20592 715 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 ACADSBP45954 432 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 CPA2P48052 419 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 GCLCP48506 637 aaPredicted RBP19.15■□□□□ 0.66
DDX39A-206ENST00000587730 SLC1A6P48664 564 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 CLCN3P51790 818 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 HDAC4P56524 1084 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 NIPAL4Q0D2K0 466 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 RBBP5Q15291 538 aaKnown RBP19.15■□□□□ 0.66
DDX39A-206ENST00000587730 AMHR2Q16671 573 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 PPP6R3Q5H9R7 873 aaPredicted RBP19.15■□□□□ 0.66
DDX39A-206ENST00000587730 TRMT10BQ6PF06 316 aaKnown RBP19.15■□□□□ 0.66
DDX39A-206ENST00000587730 GALNT15Q8N3T1 639 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 HTR3CQ8WXA8 447 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 ECSITQ9BQ95 431 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 ASCC2Q9H1I8 757 aaPredicted RBP19.15■□□□□ 0.66
DDX39A-206ENST00000587730 MINDY3Q9H8M7 445 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 ZDHHC7Q9NXF8 308 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 LRRC37A2A6NM11 1700 aa19.15■□□□□ 0.66
DDX39A-206ENST00000587730 PRR5-ARHGAP8B1AHC4 643 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 PLIN3O60664 434 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 ARIH2O95376 493 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 ARL4AP40617 200 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 ARHGAP8P85298 464 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 HNRNPDQ14103 355 aaKnown RBP19.14■□□□□ 0.65
DDX39A-206ENST00000587730 C11orf91Q3C1V1 193 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 CCDC153Q494R4 210 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 FSCBQ5H9T9 825 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 RABGAP1LQ5R372 815 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 SYCP2LQ5T4T6 812 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 KCNT2Q6UVM3 1135 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 CCDC33Q8N5R6 958 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 PIP4K2CQ8TBX8 421 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 GBP5Q96PP8 586 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 C11orf84Q9BUA3 381 aaPredicted RBP19.14■□□□□ 0.65
DDX39A-206ENST00000587730 GPATCH2LQ9NWQ4 482 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 TXNDC16Q9P2K2 825 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 GJA3Q9Y6H8 435 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 CYB561D2O14569 222 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 UGT1A9O60656 530 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 H2AFYO75367 372 aaKnown RBP19.14■□□□□ 0.65
DDX39A-206ENST00000587730 GRAP2O75791 330 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 DGKIO75912 1065 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 CPOXP36551 454 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 DEUP1Q05D60 604 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 FRG1Q14331 258 aaKnown RBP19.14■□□□□ 0.65
DDX39A-206ENST00000587730 DCAF4L1Q3SXM0 396 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 TEDDM1Q5T9Z0 273 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 MAP3K21Q5TCX8 1036 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 PMF1Q6P1K2 205 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 PACS1Q6VY07 963 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 STRADAQ7RTN6 431 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 LRRC52Q8N7C0 313 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 UCMAQ8WVF2 138 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 UGT1A7Q9HAW7 530 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 UGT1A10Q9HAW8 530 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 UGT1A8Q9HAW9 530 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 AP4E1Q9UPM8 1137 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 DNAJC16Q9Y2G8 782 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 WASF2Q9Y6W5 498 aa19.14■□□□□ 0.65
DDX39A-206ENST00000587730 SPDYE5A6NIY4 337 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 KITP10721 976 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 ACAT1P24752 427 aaKnown RBP19.13■□□□□ 0.65
DDX39A-206ENST00000587730 GRM5P41594 1212 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 TTLL4Q14679 1199 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 CA9Q16790 459 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 N4BP2L1Q5TBK1 243 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-206ENST00000587730 METTL21CQ5VZV1 264 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 IZUMO2Q6UXV1 221 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 CDR2LQ86X02 465 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-206ENST00000587730 KHSRPQ92945 711 aaKnown RBP eCLIP19.13■□□□□ 0.65
DDX39A-206ENST00000587730 PIWIL1Q96J94 861 aaKnown RBP19.13■□□□□ 0.65
DDX39A-206ENST00000587730 OLFM3Q96PB7 478 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 CSPG4P5Q96PW8 444 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 DHX35Q9H5Z1 703 aaKnown RBP19.13■□□□□ 0.65
DDX39A-206ENST00000587730 S100A14Q9HCY8 104 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 MARCOQ9UEW3 520 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-206ENST00000587730 CDY2AQ9Y6F7 541 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 CDY1Q9Y6F8 540 aa19.13■□□□□ 0.65
DDX39A-206ENST00000587730 IRF6O14896 467 aa19.12■□□□□ 0.65
DDX39A-206ENST00000587730 PAPSS1O43252 624 aaPredicted RBP19.12■□□□□ 0.65
DDX39A-206ENST00000587730 IQCF3P0C7M6 154 aa19.12■□□□□ 0.65
DDX39A-206ENST00000587730 FGF3P11487 239 aaPredicted RBP19.12■□□□□ 0.65
DDX39A-206ENST00000587730 HARS2P49590 506 aaKnown RBP19.12■□□□□ 0.65
DDX39A-206ENST00000587730 RGS7P49802 495 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms