RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 ZNF419Q96HQ0 510 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 IPO9Q96P70 1041 aaKnown RBP15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 TSG101Q99816 390 aa15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 ZSWIM1Q9BR11 485 aa15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 UBXN6Q9BZV1 441 aa15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 SLC32A1Q9H598 525 aa15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 ELOVL2Q9NXB9 296 aa15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 USP36Q9P275 1121 aaKnown RBP15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 ZMIZ1Q9ULJ6 1067 aa15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 COQ4Q9Y3A0 265 aa15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 SLCO1B1Q9Y6L6 691 aa15.88■□□□□ 0.13
PRKCSH-204ENST00000587290 NYNRINQ9P2P1 1898 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 MEI4A8MW99 385 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 O00370 1275 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 SLC16A3O15427 465 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 CYBBP04839 570 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 EPHX1P07099 455 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 NCAM1P13591 858 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 CD44P16070 742 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 HLA-FP30511 346 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 TPMTP51580 245 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 SLC8A3P57103 927 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 FKBP3Q00688 224 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 GRIK2Q13002 908 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 ENPP2Q13822 863 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 TRIP4Q15650 581 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 BSPRYQ5W0U4 402 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 FAM217AQ8IXS0 508 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 TTC39CQ8N584 583 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 WFDC5Q8TCV5 224 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 CLEC4CQ8WTT0 213 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 GATA6Q92908 595 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 FAXDC2Q96IV6 333 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 MIR1-1HGQ9H1L0 117 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 RMND1Q9NWS8 449 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 WSB2Q9NYS7 404 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 HESX1Q9UBX0 185 aa15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 ARMCX3Q9UH62 379 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-204ENST00000587290 FAM208BQ5VWN6 2430 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 RNF225M0QZC1 329 aaPredicted RBP15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 SH3BP5O60239 455 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 SYNCRIPO60506 623 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 BRD2P25440 801 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 PKDCCQ504Y2 493 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 RFWD3Q6PCD5 774 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 TMEM270Q6UE05 265 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 SERPINA13PQ6UXR4 307 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 SIX6OS1Q8N1H7 587 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 ENGASEQ8NFI3 743 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 RNF139Q8WU17 664 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 UCMAQ8WVF2 138 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 SMARCE1Q969G3 411 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 SIPA1Q96FS4 1042 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 ITM2CQ9NQX7 267 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 ABCB8Q9NUT2 735 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 CABIN1Q9Y6J0 2220 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 ZFYVE26Q68DK2 2539 aa15.86■□□□□ 0.13
PRKCSH-204ENST00000587290 FREM2Q5SZK8 3169 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 PKD1L2Q7Z442 2459 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 PLXNA2O75051 1894 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 GOLGA6L7A0A1B0GV03 622 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 GJB3O75712 270 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 FMO5P49326 533 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 HARS2P49590 506 aaKnown RBP15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 DAOAP59103 153 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 SYCP2LQ5T4T6 812 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 DCAF12L1Q5VU92 463 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 KLHL10Q6JEL2 608 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 PMF1Q6P1K2 205 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 CHCHD4Q8N4Q1 142 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 PRCCQ92733 491 aaPredicted RBP15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 FOXJ1Q92949 421 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 GSDMAQ96QA5 445 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 IL21RQ9HBE5 538 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 DNAAF2Q9NVR5 837 aaKnown RBP15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 PCDHB4Q9Y5E5 795 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 PLXNB3Q9ULL4 1909 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 PTPRBP23467 1997 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 DMXL2Q8TDJ6 3036 aa15.85■□□□□ 0.13
PRKCSH-204ENST00000587290 UPK3BL1B0FP48 263 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 UPK3BL2E5RIL1 263 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 M0QYV0 167 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 SYPP08247 313 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 SETSIPP0DME0 302 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 VDRP11473 427 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 SLC6A4P31645 630 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 ARID5AQ03989 594 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 EIF4HQ15056 248 aaKnown RBP15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 FNDC3BQ53EP0 1204 aaKnown RBP15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 MPPE1Q53F39 396 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 COBLL1Q53SF7 1204 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 WDR45BQ5MNZ6 344 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 CHST9Q7L1S5 443 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 RABEPKQ7Z6M1 372 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 ADIPOR2Q86V24 386 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 ARHGEF19Q8IW93 802 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 PPM1KQ8N3J5 372 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 PNPLA1Q8N8W4 532 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 SPATA20Q8TB22 786 aa15.84■□□□□ 0.13
PRKCSH-204ENST00000587290 SNX19Q92543 992 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms