RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 UBA3Q8TBC4 463 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 RNF139Q8WU17 664 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 KAT5Q92993 513 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 WBP2Q969T9 261 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 EIF3CQ99613 913 aaKnown RBP12.92□□□□□ -0.34
ERCC2-207ENST00000586441 ZSWIM1Q9BR11 485 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 TRIM62Q9BVG3 475 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 SLC2A11Q9BYW1 496 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 FAM207AQ9NSI2 230 aaPredicted RBP12.92□□□□□ -0.34
ERCC2-207ENST00000586441 APEX2Q9UBZ4 518 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 STOML2Q9UJZ1 356 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 SLC27A6Q9Y2P4 619 aa12.92□□□□□ -0.34
ERCC2-207ENST00000586441 DMDP11532 3685 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 TBC1D3BA6NDS4 549 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 TULP2O00295 520 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 NPC1O15118 1278 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 AXIN1O15169 862 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 RPP40O75818 363 aaKnown RBP12.91□□□□□ -0.34
ERCC2-207ENST00000586441 ALDH1A2O94788 518 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 PENKP01210 267 aaPredicted RBP12.91□□□□□ -0.34
ERCC2-207ENST00000586441 KLKB1P03952 638 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 IRF1P10914 325 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 TYRP14679 529 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 GPD2P43304 727 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 KLK7P49862 253 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 DAOAP59103 153 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 RING1Q06587 406 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 DMWDQ09019 674 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 SPA17Q15506 151 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 ANO4Q32M45 955 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 MSANTD2Q6P1R3 559 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 MTERF4Q7Z6M4 381 aaKnown RBP12.91□□□□□ -0.34
ERCC2-207ENST00000586441 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 MIB1Q86YT6 1006 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 TERB1Q8NA31 727 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 IL17RCQ8NAC3 791 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 ZNF606Q8WXB4 792 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 SHC3Q92529 594 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 AZIN2Q96A70 460 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 CCDC42Q96M95 316 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 CHP1Q99653 195 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 LSM14BQ9BX40 385 aaKnown RBP12.91□□□□□ -0.34
ERCC2-207ENST00000586441 BBS2Q9BXC9 721 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 TSGA10Q9BZW7 698 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 HAUS4Q9H6D7 363 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 NHEJ1Q9H9Q4 299 aaPredicted RBP12.91□□□□□ -0.34
ERCC2-207ENST00000586441 PLCB1Q9NQ66 1216 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 NUDT5Q9UKK9 219 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 MYO6Q9UM54 1294 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 RALGAPA1Q6GYQ0 2036 aa12.91□□□□□ -0.34
ERCC2-207ENST00000586441 SSU72P8A0A1W2PR75 194 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 YJEFN3A6XGL0 299 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 PRR5-ARHGAP8B1AHC4 643 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 E7ENQ6 273 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 GFRA2O00451 464 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 GABBR2O75899 941 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 CISD3P0C7P0 127 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 TGM1P22735 817 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 PON1P27169 355 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 HARS2P49590 506 aaKnown RBP12.9□□□□□ -0.34
ERCC2-207ENST00000586441 ARHGAP8P85298 464 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 KCNMA1Q12791 1236 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 EFEMP1Q12805 493 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 NNTQ13423 1086 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 C2orf27AQ580R0 203 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 MPP7Q5T2T1 576 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 HEATR6Q6AI08 1181 aaKnown RBP12.9□□□□□ -0.34
ERCC2-207ENST00000586441 GRAMD4Q6IC98 578 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 KIAA1328Q86T90 577 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 TMEM110Q86TL2 294 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 FMNL3Q8IVF7 1028 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 TSTD1Q8NFU3 115 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 GOLGA1Q92805 767 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 HINFPQ9BQA5 517 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 SLC4A5Q9BY07 1137 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 POLMQ9NP87 494 aaPredicted RBP12.9□□□□□ -0.34
ERCC2-207ENST00000586441 LUC7LQ9NQ29 371 aaKnown RBP12.9□□□□□ -0.34
ERCC2-207ENST00000586441 LZTFL1Q9NQ48 299 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 RASAL2Q9UJF2 1139 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 AGO1Q9UL18 857 aaKnown RBP12.9□□□□□ -0.34
ERCC2-207ENST00000586441 PCDHGA5Q9Y5G8 931 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 EML5Q05BV3 1969 aa12.9□□□□□ -0.34
ERCC2-207ENST00000586441 SLC12A8A0AV02 714 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 NEDD8-MDP1E9PL57 170 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 M0QYV0 167 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 SCAMP3O14828 347 aaKnown RBP12.89□□□□□ -0.35
ERCC2-207ENST00000586441 MDM4O15151 490 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 TIMM44O43615 452 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 KRT86O43790 486 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 URI1O94763 535 aaPredicted RBP12.89□□□□□ -0.35
ERCC2-207ENST00000586441 LTFP02788 710 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 CYBBP04839 570 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 KRT5P13647 590 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 HNRNPLP14866 589 aaKnown RBP eCLIP12.89□□□□□ -0.35
ERCC2-207ENST00000586441 SLC9A1P19634 815 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 BRD2P25440 801 aaKnown RBP12.89□□□□□ -0.35
ERCC2-207ENST00000586441 CORO1AP31146 461 aaKnown RBP12.89□□□□□ -0.35
ERCC2-207ENST00000586441 DGKGP49619 791 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 SNX16P57768 344 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 BPIFB4P59827 614 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms