RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 STARD13Q9Y3M8 1113 aa16.91■□□□□ 0.3
ERBB2-222ENST00000584908 PCDHGA2Q9Y5H1 932 aa16.91■□□□□ 0.3
ERBB2-222ENST00000584908 CYBBP04839 570 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 MATKP42679 507 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 SLC11A2P49281 568 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 NRLP54845 237 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 GSCP56915 257 aaPredicted RBP16.9■□□□□ 0.3
ERBB2-222ENST00000584908 UBASH3AP57075 661 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 CDK17Q00537 523 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 KDSRQ06136 332 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 MPPE1Q53F39 396 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 FAM133BQ5BKY9 247 aaKnown RBP16.9■□□□□ 0.3
ERBB2-222ENST00000584908 MPP7Q5T2T1 576 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 GRAMD4Q6IC98 578 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 ZC3H14Q6PJT7 736 aaKnown RBP16.9■□□□□ 0.3
ERBB2-222ENST00000584908 NUDT18Q6ZVK8 323 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 SYT13Q7L8C5 426 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 SFTPA1Q8IWL2 248 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 RPLP0P6Q8NHW5 317 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 OLIG1Q8TAK6 271 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 ADAM32Q8TC27 787 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 PCDHB18PQ96TA0 734 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 PHOX2BQ99453 314 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 SLC2A11Q9BYW1 496 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 TSPY26PQ9H489 355 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 TMEM51Q9NW97 253 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 ZSCAN32Q9NX65 697 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 AIPL1Q9NZN9 384 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 TMEM59LQ9UK28 342 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 ZNF292O60281 2723 aa16.9■□□□□ 0.3
ERBB2-222ENST00000584908 LRRC53A6NM62 1247 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 TRIM24O15164 1050 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 LILRB5O75023 590 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 GRAP2O75791 330 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 DGKGP49619 791 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 ARID5AQ03989 594 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 PTP4A2Q12974 167 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 CLEC16AQ2KHT3 1053 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 PIK3R6Q5UE93 754 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 NADSYN1Q6IA69 706 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 TSSK4Q6SA08 328 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 PGAP3Q96FM1 320 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-222ENST00000584908 NPY6RQ99463 290 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 AGPAT1Q99943 283 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 NUP58Q9BVL2 599 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.89■□□□□ 0.29
ERBB2-222ENST00000584908 PLK2Q9NYY3 685 aa16.89■□□□□ 0.29
ERBB2-222ENST00000584908 EML5Q05BV3 1969 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 CCDC163A0A0D9SF12 145 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 A0A1W2PQJ5 194 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 TBC1D3BA6NDS4 549 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 ANTXRLA6NF34 631 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 KCNU1A8MYU2 1149 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 APOEP02649 317 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 SLC2A3P11169 496 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 HOXD9P28356 352 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-222ENST00000584908 SLC6A4P31645 630 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 GBP1P32455 592 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 PRKCIP41743 596 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 C2CD6Q53TS8 623 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 ZC3H12AQ5D1E8 599 aaKnown RBP16.88■□□□□ 0.29
ERBB2-222ENST00000584908 FAM102AQ5T9C2 384 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-222ENST00000584908 OTUD1Q5VV17 481 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-222ENST00000584908 BNIPLQ7Z465 357 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 PHF13Q86YI8 300 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-222ENST00000584908 CAMKK1Q8N5S9 505 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 IL17RCQ8NAC3 791 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 DDI1Q8WTU0 396 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 IQCDQ96DY2 449 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 TMA16Q96EY4 203 aaKnown RBP16.88■□□□□ 0.29
ERBB2-222ENST00000584908 BTN2A3PQ96KV6 586 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 DDX50Q9BQ39 737 aaKnown RBP16.88■□□□□ 0.29
ERBB2-222ENST00000584908 DDIT4Q9NX09 232 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.88■□□□□ 0.29
ERBB2-222ENST00000584908 HCN2Q9UL51 889 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 MMP17Q9ULZ9 603 aa16.88■□□□□ 0.29
ERBB2-222ENST00000584908 RIF1Q5UIP0 2472 aaKnown RBP16.87■□□□□ 0.29
ERBB2-222ENST00000584908 PRRT4C9JH25 899 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 CCR1P32246 355 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 NSFP46459 744 aaKnown RBP16.87■□□□□ 0.29
ERBB2-222ENST00000584908 SEC13P55735 322 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 MTA1Q13330 715 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 DMC1Q14565 340 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 C2orf27AQ580R0 203 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 C10orf76Q5T2E6 689 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 MMS22LQ6ZRQ5 1243 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 SLC30A5Q8TAD4 765 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 BHMTQ93088 406 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 ADAM33Q9BZ11 813 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 FAM204AQ9H8W3 233 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 IFNKQ9P0W0 207 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 CALCOCO1Q9P1Z2 691 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 CLEC4EQ9ULY5 219 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 STAP1Q9ULZ2 295 aa16.87■□□□□ 0.29
ERBB2-222ENST00000584908 GOLGA6L7A0A1B0GV03 622 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.29
ERBB2-222ENST00000584908 FLT3P36888 993 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 SGSHP51688 502 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 SLC25A52Q3SY17 297 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms