RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 TJP2Q9UDY2 1190 aa28.26■■■□□ 2.11
SMARCD2-210ENST00000584400 SLC12A6Q9UHW9 1150 aa28.26■■■□□ 2.11
SMARCD2-210ENST00000584400 EPHB6O15197 1021 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 SLC2A3P11169 496 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 CDR2Q01850 454 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 MTA1Q13330 715 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 SIM2Q14190 667 aaPredicted RBP28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 EMC10Q5UCC4 262 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 OLFML1Q6UWY5 402 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 SLC26A9Q7LBE3 791 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 SFTPA1Q8IWL2 248 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 DEFB106AQ8N104 65 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 ZNF397Q8NF99 534 aaPredicted RBP28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 RUBCNQ92622 972 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 SLC39A13Q96H72 371 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 FCRL2Q96LA5 508 aaPredicted RBP28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 TMEM51Q9NW97 253 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 RRN3Q9NYV6 651 aa28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 SMG5Q9UPR3 1016 aaKnown RBP28.25■■■□□ 2.11
SMARCD2-210ENST00000584400 TRIM24O15164 1050 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 AXIN1O15169 862 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 SCNN1AP37088 669 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 GABRB2P47870 512 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 MPP7Q5T2T1 576 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 TRIM72Q6ZMU5 477 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 ADAM32Q8TC27 787 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 UCMAQ8WVF2 138 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 HINFPQ9BQA5 517 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 FAM204AQ9H8W3 233 aa28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 RTN4Q9NQC3 1192 aaKnown RBP28.24■■■□□ 2.11
SMARCD2-210ENST00000584400 NPC1O15118 1278 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 TSPAN3O60637 253 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 MMEP08473 750 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 NTSR1P30989 418 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 NOS2P35228 1153 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 TAF5Q15542 800 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 PRR23BQ6ZRT6 265 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 CEP68Q76N32 757 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 ANKS1BQ7Z6G8 1248 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 CHPFQ8IZ52 775 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 PIWIL1Q96J94 861 aaKnown RBP28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 NCDNQ9UBB6 729 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 NOCTQ9UK39 431 aaKnown RBP28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 STAP1Q9ULZ2 295 aa28.23■■■□□ 2.11
SMARCD2-210ENST00000584400 SGK1O00141 431 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 ZBTB24O43167 697 aaPredicted RBP28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 HRO43593 1189 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 DAB1O75553 588 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 SERPINC1P01008 464 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 IGLV3-25P01717 112 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 PXNP49023 591 aaPredicted RBP28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 IQCB1Q15051 598 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 EIF4HQ15056 248 aaKnown RBP28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 CCDC117Q8IWD4 279 aaPredicted RBP28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 ATP6V0D2Q8N8Y2 350 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 GAB3Q8WWW8 586 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 BTN2A3PQ96KV6 586 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 POLR3BQ9NW08 1133 aaPredicted RBP28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 DDIT4Q9NX09 232 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 GMEB2Q9UKD1 530 aa28.22■■■□□ 2.11
SMARCD2-210ENST00000584400 PRRT4C9JH25 899 aa28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 GFRA2O00451 464 aa28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 TIMM44O43615 452 aa28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 GRAP2O75791 330 aa28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 RPP40O75818 363 aaKnown RBP28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 HOXD9P28356 352 aaPredicted RBP28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 CCR1P32246 355 aa28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 NOMO3P69849 1222 aa28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 PIK3R6Q5UE93 754 aa28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 HJURPQ8NCD3 748 aaPredicted RBP28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 RNF34Q969K3 372 aa28.21■■■□□ 2.11
SMARCD2-210ENST00000584400 GOLGA6L19H0YKK7 550 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 MOCS2O96007 188 aaPredicted RBP28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 CHRM1P11229 460 aaPredicted RBP28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 HNRNPLP14866 589 aaKnown RBP eCLIP28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 ABCB4P21439 1286 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 MATKP42679 507 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 FAM133BQ5BKY9 247 aaKnown RBP28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 ZC3H12AQ5D1E8 599 aaKnown RBP28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 FAM102AQ5T9C2 384 aaPredicted RBP28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 NAA35Q5VZE5 725 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 LAIR1Q6GTX8 287 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 ANO7Q6IWH7 933 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 RASSF3Q86WH2 238 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 CPA5Q8WXQ8 436 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 CBX8Q9HC52 389 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 MYO6Q9UM54 1294 aa28.2■■■□□ 2.1
SMARCD2-210ENST00000584400 A0A1W2PQC6 194 aa28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 ANTXRLA6NF34 631 aa28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 ADAM23O75077 832 aa28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 CYP1A1P04798 512 aaPredicted RBP28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 HOXB2P14652 356 aa28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 ARID5AQ03989 594 aa28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 ZSCAN23Q3MJ62 389 aa28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 USP39Q53GS9 565 aaKnown RBP28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 EGFLAMQ63HQ2 1017 aa28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 TMEM92Q6UXU6 159 aa28.19■■■□□ 2.1
SMARCD2-210ENST00000584400 C11orf74Q86VG3 221 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms