RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 NDST4Q9H3R1 872 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 CBX8Q9HC52 389 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 PNPLA8Q9NP80 782 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 DNMT3LQ9UJW3 386 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 SLC6A14Q9UN76 642 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 CKAP5Q14008 2032 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 PMM2O15305 246 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 SERPINF2P08697 491 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 IQCB1Q15051 598 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 KRT31Q15323 416 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 FUT11Q495W5 492 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 MIIPQ5JXC2 388 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 FYB2Q5VWT5 728 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 KLHDC10Q6PID8 442 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 EHBP1Q8NDI1 1231 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 ZCCHC14Q8WYQ9 949 aaKnown RBP16.4■□□□□ 0.22
SKA2-209ENST00000583976 CAMK1GQ96NX5 476 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 HSD3B7Q9H2F3 369 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 WDR35Q9P2L0 1181 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 CLEC4EQ9ULY5 219 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 STON1Q9Y6Q2 735 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 CELSR3Q9NYQ7 3312 aa16.4■□□□□ 0.22
SKA2-209ENST00000583976 PCNX2A6NKB5 2137 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 PENKP01210 267 aaPredicted RBP16.39■□□□□ 0.21
SKA2-209ENST00000583976 ATP1A3P13637 1013 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 MAOBP27338 520 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 CORO1AP31146 461 aaKnown RBP16.39■□□□□ 0.21
SKA2-209ENST00000583976 DPP6P42658 865 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 IL12RB1P42701 662 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 MFAP3P55082 362 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 GFPT1Q06210 699 aaPredicted RBP16.39■□□□□ 0.21
SKA2-209ENST00000583976 EFEMP1Q12805 493 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 LRSAM1Q6UWE0 723 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 NUDT18Q6ZVK8 323 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 LUZP1Q86V48 1076 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 HDDC3Q8N4P3 179 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 KDF1Q8NAX2 398 aaPredicted RBP16.39■□□□□ 0.21
SKA2-209ENST00000583976 LMO3Q8TAP4 145 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 MKRN2Q9H000 416 aaKnown RBP16.39■□□□□ 0.21
SKA2-209ENST00000583976 INTS2Q9H0H0 1204 aaKnown RBP16.39■□□□□ 0.21
SKA2-209ENST00000583976 TSPY26PQ9H489 355 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 SLC32A1Q9H598 525 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 CYP3A43Q9HB55 503 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 USP3Q9Y6I4 520 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 LAMA5O15230 3695 aa16.39■□□□□ 0.21
SKA2-209ENST00000583976 ZNF217O75362 1048 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 TPM2P07951 284 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 CD59P13987 128 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 ZNF18P17022 549 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 SLC9A1P19634 815 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 PRKCHP24723 683 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 PLA2G4AP47712 749 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 SDE2Q6IQ49 451 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 GBP6Q6ZN66 633 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 RGL4Q8IZJ4 473 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 ANKRD20A12PQ8NF67 263 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 CEP76Q8TAP6 659 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 SORCS1Q8WY21 1168 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 NDRG1Q92597 394 aaKnown RBP16.38■□□□□ 0.21
SKA2-209ENST00000583976 NT5C1BQ96P26 610 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 DUSP16Q9BY84 665 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 CACNA1GO43497 2377 aa16.38■□□□□ 0.21
SKA2-209ENST00000583976 TULP2O00295 520 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 ARHGAP33O14559 1287 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 OPHN1O60890 802 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 COPB1P53618 953 aaKnown RBP16.37■□□□□ 0.21
SKA2-209ENST00000583976 APBA1Q02410 837 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 GRIK2Q13002 908 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 CUL2Q13617 745 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 EXOC3L4Q17RC7 722 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 PLEKHG6Q3KR16 790 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 RRAGAQ7L523 313 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 BHLHA9Q7RTU4 235 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 PIGZQ86VD9 579 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 DENND1CQ8IV53 801 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 ARHGEF19Q8IW93 802 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 PPM1KQ8N3J5 372 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 ZCCHC9Q8N567 271 aaKnown RBP16.37■□□□□ 0.21
SKA2-209ENST00000583976 SLC4A11Q8NBS3 891 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 TOE1Q96GM8 510 aaKnown RBP16.37■□□□□ 0.21
SKA2-209ENST00000583976 CISHQ9NSE2 258 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 USP36Q9P275 1121 aaKnown RBP16.37■□□□□ 0.21
SKA2-209ENST00000583976 LIMA1Q9UHB6 759 aaKnown RBP16.37■□□□□ 0.21
SKA2-209ENST00000583976 FBXO10Q9UK96 956 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 AGO1Q9UL18 857 aaKnown RBP16.37■□□□□ 0.21
SKA2-209ENST00000583976 NEUROG3Q9Y4Z2 214 aa16.37■□□□□ 0.21
SKA2-209ENST00000583976 DSPP15924 2871 aaKnown RBP16.36■□□□□ 0.21
SKA2-209ENST00000583976 LOC400499M0QZD8 3231 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 MEI4A8MW99 385 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 UPK3BL1B0FP48 263 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 UPK3BL2E5RIL1 263 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 GOLGA6L19H0YKK7 550 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 NDUFS2O75306 463 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 GJB3O75712 270 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 RALAP11233 206 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 HOXB3P14651 431 aaPredicted RBP16.36■□□□□ 0.21
SKA2-209ENST00000583976 TRIM21P19474 475 aaKnown RBP16.36■□□□□ 0.21
SKA2-209ENST00000583976 CD6P30203 668 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 RAD23BP54727 409 aa16.36■□□□□ 0.21
SKA2-209ENST00000583976 STARD3Q14849 445 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms