RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 RHBDD1Q8TEB9 315 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 SETD7Q8WTS6 366 aaKnown RBP5.63□□□□□ -1.51
VAPA-207ENST00000583879 SCFD1Q8WVM8 642 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 ERLEC1Q96DZ1 483 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 TOE1Q96GM8 510 aaKnown RBP5.63□□□□□ -1.51
VAPA-207ENST00000583879 BBS2Q9BXC9 721 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 PANK2Q9BZ23 570 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 NACA2Q9H009 215 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 SLC6A17Q9H1V8 727 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 GAREM1Q9H706 876 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 IL21RQ9HBE5 538 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 CD93Q9NPY3 652 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 TM7SF3Q9NS93 570 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 CACNA2D2Q9NY47 1150 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 WSB2Q9NYS7 404 aaPredicted RBP5.63□□□□□ -1.51
VAPA-207ENST00000583879 HSPBP1Q9NZL4 362 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 MARK1Q9P0L2 795 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 FBXO2Q9UK22 296 aaPredicted RBP5.63□□□□□ -1.51
VAPA-207ENST00000583879 FBXO10Q9UK96 956 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 SMC3Q9UQE7 1217 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 RAXQ9Y2V3 346 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 NFE2L3Q9Y4A8 694 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 SRPRBQ9Y5M8 271 aaKnown RBP5.63□□□□□ -1.51
VAPA-207ENST00000583879 RAD54BQ9Y620 910 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 CLIC4Q9Y696 253 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 STON1Q9Y6Q2 735 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 SCN1AP35498 2009 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 ATG2BQ96BY7 2078 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 FAM208BQ5VWN6 2430 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 ATRXP46100 2492 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 FREM2Q5SZK8 3169 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 EIF4E1BA6NMX2 242 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 BCAT2O15382 392 aaPredicted RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 TGFB1I1O43294 461 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 TLR5O60602 858 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 CILPO75339 1184 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 DKK1O94907 266 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 TBX18O95935 607 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 ATXN1LP0C7T5 689 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 DLATP10515 647 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 IRF1P10914 325 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 NCAM1P13591 858 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 ACO1P21399 889 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 ADH6P28332 368 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 OXTRP30559 389 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 ATICP31939 592 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 HOXD13P35453 343 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 TXLNAP40222 546 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 MATKP42679 507 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 PLA2G4AP47712 749 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 PGFP49763 221 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 CDH8P55286 799 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 MYL6P60660 151 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 BNC1Q01954 994 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 CYP4F3Q08477 520 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 TRPC3Q13507 836 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 ENPP2Q13822 863 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 PSMD6Q15008 389 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 RABEP1Q15276 862 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 SNRNP35Q16560 246 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 HLA-BQ31612 363 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 DCAF12L1Q5VU92 463 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 IL27RAQ6UWB1 636 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 KIAA1324Q6UXG2 1013 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 STXBP4Q6ZWJ1 553 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 TMPRSS6Q8IU80 811 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 CCDC65Q8IXS2 484 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 FUKQ8N0W3 1084 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 GALNT15Q8N3T1 639 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 GLIS3Q8NEA6 775 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 ZMIZ2Q8NF64 920 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 BAHD1Q8TBE0 780 aaPredicted RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 ZNF507Q8TCN5 953 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 COL26A1Q96A83 441 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 CCDC127Q96BQ5 260 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 SMARCD1Q96GM5 515 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 TNIP3Q96KP6 325 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 CLIC6Q96NY7 704 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 CDC6Q99741 560 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 MED10Q9BTT4 135 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 NUP58Q9BVL2 599 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 GPR174Q9BXC1 333 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 MKRN2Q9H000 416 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 XYLT2Q9H1B5 865 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 MIR1-1HGQ9H1L0 117 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 FBXO44Q9H4M3 255 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 CSNK1G1Q9HCP0 422 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 DMAP1Q9NPF5 467 aaPredicted RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.62□□□□□ -1.519e-8■■■□□ 18.4
VAPA-207ENST00000583879 TLR8Q9NR97 1041 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 PPP4R2Q9NY27 417 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 GMIPQ9P107 970 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 USP36Q9P275 1121 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 LSM7Q9UK45 103 aaKnown RBP5.62□□□□□ -1.51
VAPA-207ENST00000583879 SLC27A6Q9Y2P4 619 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 PCDHGC4Q9Y5F7 938 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 PCDHGB2Q9Y5G2 931 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 TSC2P49815 1807 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 THADAQ6YHU6 1953 aa5.62□□□□□ -1.51
VAPA-207ENST00000583879 SPAG17Q6Q759 2223 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms