RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 LCP1P13796 627 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 PRKCHP24723 683 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 CETN1Q12798 172 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 GRIK2Q13002 908 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 HNRNPDQ14103 355 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 TRIP4Q15650 581 aaPredicted RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 FNDC3BQ53EP0 1204 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 BSPRYQ5W0U4 402 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 PM20D1Q6GTS8 502 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 TMEM270Q6UE05 265 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 METTL3Q86U44 580 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 TMPRSS6Q8IU80 811 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 FAM217AQ8IXS0 508 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 ZC3H3Q8IXZ2 948 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 FMR1NBQ8N0W7 255 aaPredicted RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 AHI1Q8N157 1196 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 PPM1KQ8N3J5 372 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 ZCCHC9Q8N567 271 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 ZNF557Q8N988 423 aaPredicted RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 UBA3Q8TBC4 463 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 WFIKKN2Q8TEU8 576 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 SNX19Q92543 992 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 EDEM1Q92611 657 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 SLC35C1Q96A29 364 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 TOE1Q96GM8 510 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 ZNF419Q96HQ0 510 aaPredicted RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 SCNM1Q9BWG6 230 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 GPR174Q9BXC1 333 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 ZDHHC5Q9C0B5 715 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 MKRN2Q9H000 416 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 MIR1-1HGQ9H1L0 117 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 CNGB3Q9NQW8 809 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 DNAAF2Q9NVR5 837 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 ELOVL2Q9NXB9 296 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 USP36Q9P275 1121 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 THAP10Q9P2Z0 257 aaPredicted RBP9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 SFMBT1Q9UHJ3 866 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 COQ4Q9Y3A0 265 aa9.09□□□□□ -0.95
CDK5RAP3-229ENST00000583697 A0A1B0GTW7 788 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 YJEFN3A6XGL0 299 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 E7ENQ6 273 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 O00370 1275 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 MSI1O43347 362 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 TSPAN3O60637 253 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 CER1O95813 267 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 DNTTP04053 509 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 PAEPP09466 180 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 MAOBP27338 520 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 HOXD9P28356 352 aaPredicted RBP9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 OXTRP30559 389 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 SLC11A2P49281 568 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 FMO5P49326 533 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 TPMTP51580 245 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 COPAP53621 1224 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 PMS1P54277 932 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 DAOAP59103 153 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 SLC14A1Q13336 389 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 ENPP2Q13822 863 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 STILQ15468 1287 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 NFKBIBQ15653 356 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 DCAF12L1Q5VU92 463 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 NUGGCQ68CJ6 796 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 ANKRD40Q6AI12 368 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 CHST9Q7L1S5 443 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 BHLHA9Q7RTU4 235 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 NAXDQ8IW45 347 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 CCDC117Q8IWD4 279 aaPredicted RBP9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 CADM4Q8NFZ8 388 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 OR2I1PQ8NGU4 316 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 OR2T3Q8NH03 318 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 ZCCHC14Q8WYQ9 949 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 KCTD13Q8WZ19 329 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 NDRG1Q92597 394 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 ERCC4Q92889 916 aaPredicted RBP9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 P2RY11Q96G91 374 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 PIWIL1Q96J94 861 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 TIGD1Q96MW7 591 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 LHX5Q9H2C1 402 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 FBRSQ9HAH7 460 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 ITM2CQ9NQX7 267 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 WSB2Q9NYS7 404 aaPredicted RBP9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 GGA2Q9UJY4 613 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 KIAA1257Q9ULG3 409 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 ZMIZ1Q9ULJ6 1067 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 NFE2L3Q9Y4A8 694 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 NEUROG3Q9Y4Z2 214 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 PCDHB9Q9Y5E1 797 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 PCDHB4Q9Y5E5 795 aa9.08□□□□□ -0.96
CDK5RAP3-229ENST00000583697 TP53BP1Q12888 1972 aaPredicted RBP9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 BICDL2A1A5D9 508 aa9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 KCNJ18B7U540 433 aa9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 PIK3R2O00459 728 aa9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 TIMM44O43615 452 aa9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 TOP3BO95985 862 aaKnown RBP9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 ATP5BP06576 529 aaKnown RBP9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 PABPC1P11940 636 aaKnown RBP9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 HLA-FP30511 346 aa9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 RGS7P49802 495 aa9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 MCCD1P59942 119 aaPredicted RBP9.07□□□□□ -0.96
CDK5RAP3-229ENST00000583697 ST8SIA6P61647 398 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms