RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 DHX34Q14147 1143 aaKnown RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 SOWAHCQ53LP3 525 aaPredicted RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 TRNP1Q6NT89 227 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 VSTM1Q6UX27 236 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 STRADAQ7RTN6 431 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 PSTKQ8IV42 348 aaKnown RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 GPR65Q8IYL9 337 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 EMC1Q8N766 993 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 PRELID2Q8N945 189 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 CCDC26Q8TAB7 109 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 SEC14L1Q92503 715 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 SLCO2A1Q92959 643 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 MYLPFQ96A32 169 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 CLDN23Q96B33 292 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 CEP295NLQ96MC4 621 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 SLC2A13Q96QE2 648 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 MED10Q9BTT4 135 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 RPP25Q9BUL9 199 aaKnown RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 DMAP1Q9NPF5 467 aaPredicted RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 PRMT8Q9NR22 394 aaPredicted RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 KRT82Q9NSB4 513 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 RRN3Q9NYV6 651 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 PCYOX1Q9UHG3 505 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 COL4A3Q01955 1670 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 DMXL2Q8TDJ6 3036 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 C2orf16Q68DN1 1984 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 CCDC195A0A1B0GUA6 201 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 FAM187AA6NFU0 413 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 F8W810 466 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 ATP8B1O43520 1251 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 FOXD2O60548 495 aaPredicted RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 PHF2O75151 1096 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 DAB1O75553 588 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 KCNK5O95279 499 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 CD72P21854 359 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 MIPP30301 263 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 SDC4P31431 198 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 FNTAP49354 379 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 ALDH7A1P49419 539 aaKnown RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 LIMK1P53667 647 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 DRG2P55039 364 aaKnown RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 BCAR1P56945 870 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 MAP3K7CLP57077 242 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 DAOAP59103 153 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 TAF5Q15542 800 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 CCNG2Q16589 344 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 SLC25A52Q3SY17 297 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 SLC44A4Q53GD3 710 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 C8orf74Q6P047 294 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 FUT10Q6P4F1 479 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 DRICH1Q6PGQ1 229 aaPredicted RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 CCNI2Q6ZMN8 369 aaPredicted RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 C2orf15Q8WU43 125 aaKnown RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 PGAP3Q96FM1 320 aaPredicted RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 TMEM169Q96HH4 297 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 PIWIL1Q96J94 861 aaKnown RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 C8orf48Q96LL4 319 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 KLHL5Q96PQ7 755 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 SLITRK1Q96PX8 696 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 PNKPQ96T60 521 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 KRT12Q99456 494 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 TRIM62Q9BVG3 475 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 FRMD8P1Q9BZ68 369 aaPredicted RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 OSBPL8Q9BZF1 889 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 GPR62Q9BZJ7 368 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 PRDM16Q9HAZ2 1276 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 GDF3Q9NR23 364 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 TMLHEQ9NVH6 421 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.43□□□□□ -0.42
GGA3-217ENST00000583667 STIM2Q9P246 746 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 FEZ2Q9UHY8 353 aaPredicted RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 PRG3Q9Y2Y8 225 aaPredicted RBP12.43□□□□□ -0.42
GGA3-217ENST00000583667 BACE2Q9Y5Z0 518 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 NUMBLQ9Y6R0 609 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 BPTFQ12830 3046 aa12.43□□□□□ -0.42
GGA3-217ENST00000583667 CLUHO75153 1309 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 C3orf70A6NLC5 250 aaPredicted RBP12.42□□□□□ -0.42
GGA3-217ENST00000583667 CYSRT1A8MQ03 144 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 TNFRSF10BO14763 440 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 MDM4O15151 490 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 TJP3O95049 919 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 ZBED1O96006 694 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 RHOXF2BP0C7M4 288 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 RARAP10276 462 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 TDGF1P13385 188 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 LCP1P13796 627 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 KLRC2P26717 231 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 IL1R2P27930 398 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 CDKN2BP42772 138 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 ARSEP51690 589 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 TKTL1P51854 596 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 RNASE9P60153 205 aaKnown RBP12.42□□□□□ -0.42
GGA3-217ENST00000583667 PRKCQQ04759 706 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 ADIGQ0VDE8 80 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 GPR17Q13304 367 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 MLF2Q15773 248 aaPredicted RBP12.42□□□□□ -0.42
GGA3-217ENST00000583667 CCDC142Q17RM4 750 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 TFDP3Q5H9I0 405 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 FAM171A1Q5VUB5 890 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 ZNF280DQ6N043 979 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms