RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 COMTP21964 271 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 ADORA2AP29274 412 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 PBX1P40424 430 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 DPP6P42658 865 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 SNX16P57768 344 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 RNASELQ05823 741 aaKnown RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 PTP4A2Q12974 167 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 CDC37Q16543 378 aaPredicted RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 DUSP28Q4G0W2 176 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 HECTD3Q5T447 861 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 TAPT1Q6NXT6 567 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 PIK3AP1Q6ZUJ8 805 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 SZRD1Q7Z422 152 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 MTERF4Q7Z6M4 381 aaKnown RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 GALNT13Q8IUC8 556 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 RHOT2Q8IXI1 618 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 RPAP2Q8IXW5 612 aaPredicted RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 SRBD1Q8N5C6 995 aaKnown RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 ZFP28Q8NHY6 868 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 POC1BQ8TC44 478 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 RUFY2Q8WXA3 655 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 TBC1D5Q92609 795 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 ANP32BQ92688 251 aaKnown RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 RABGGTAQ92696 567 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 ATP2A3Q93084 1043 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 VMP1Q96GC9 406 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 ZDHHC12Q96GR4 267 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 OR14A2Q96R54 314 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 HAPLN3Q96S86 360 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 LBHD1Q9BQE6 289 aaPredicted RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 PLA2G12BQ9BX93 195 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 AGO3Q9H9G7 860 aaKnown RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 VEZTQ9HBM0 779 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 TAS2R10Q9NYW0 307 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 PLA2G3Q9NZ20 509 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 POGKQ9P215 609 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 RAB21Q9UL25 225 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 NDRG4Q9ULP0 352 aaKnown RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 CORO1CQ9ULV4 474 aaPredicted RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 SLC27A6Q9Y2P4 619 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 ZNF711Q9Y462 761 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 LOC105369274A0A096LPK9 316 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 LOC102723532A0A0G2JNH3 316 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 TSPAN4O14817 238 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 SEPT4O43236 478 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 AKAP8O43823 692 aaKnown RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 TULP3O75386 442 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 SPARCP09486 303 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 SPATA31D3P0C874 917 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 RARGP13631 454 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 IL11P20809 199 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 TACR2P21452 398 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 PRKCHP24723 683 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 NFKBIAP25963 317 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 PRKAR1BP31321 381 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 TNNT2P45379 298 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 MCM2P49736 904 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 CDH15P55291 814 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 FAM3BP58499 235 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 SATB1Q01826 763 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 PRKD1Q15139 912 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 LY6KQ17RY6 165 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 ARHGAP40Q5TG30 622 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 NUGGCQ68CJ6 796 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 EFCAB12Q6NXP0 572 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 INO80CQ6PI98 192 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 SPATA31D4Q6ZUB0 917 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 KRT74Q7RTS7 529 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 ZSCAN30Q86W11 494 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 OR4N4Q8N0Y3 316 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 TAGAPQ8N103 731 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 C17orf53Q8N3J3 647 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 FSTL5Q8N475 847 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 LSM14AQ8ND56 463 aaKnown RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 MBD3L2Q8NHZ7 208 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 NFKBIDQ8NI38 313 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 ZNF483Q8TF39 744 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 NCSTNQ92542 709 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 ELP4Q96EB1 424 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 FAM120BQ96EK7 910 aaKnown RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 PERPQ96FX8 193 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 REXO5Q96IC2 774 aaKnown RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 LENG8Q96PV6 779 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 PPP1R10Q96QC0 940 aaKnown RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 WDR24Q96S15 920 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 TCF25Q9BQ70 676 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 DESI2Q9BSY9 194 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 ZNF747Q9BV97 191 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 RETREG1Q9H6L5 497 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 CCDC177Q9NQR7 707 aaPredicted RBP5.3□□□□□ -1.56
SS18-223ENST00000583595 SORCS3Q9UPU3 1222 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 HDAC5Q9UQL6 1122 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 ZBTB1Q9Y2K1 713 aa5.3□□□□□ -1.56
SS18-223ENST00000583595 KDM3AQ9Y4C1 1321 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 NPIPB15A6NHN6 443 aaPredicted RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 SH2D7A6NKC9 451 aaPredicted RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 M0QZQ0 153 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 GUCY1B2O75343 617 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 TSPAN9O75954 239 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms