RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 NFU1Q9UMS0 254 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 UBE2J1Q9Y385 318 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 CCDC189A1A4V9 331 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 SLC38A8A6NNN8 435 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 TARM1B6A8C7 271 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 CLIC1O00299 241 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 GCATO75600 419 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 LARGE1O95461 756 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 MT-CO3P00414 261 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 SERPINA4P29622 427 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 CCT5P48643 541 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 CLK3P49761 638 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 FAM3BP58499 235 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 CBFBQ13951 182 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 MFSD13AQ14CX5 517 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 GALNTL6Q49A17 601 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 AWAT1Q58HT5 328 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 TTC22Q5TAA0 569 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 TMEM65Q6PI78 240 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 SYT13Q7L8C5 426 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 ANKRD18AQ8IVF6 992 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 OR52L2PQ8NGH6 319 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 OR6Y1Q8NGX8 325 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 CPT1BQ92523 772 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 FAR2Q96K12 515 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 ZSCAN31Q96LW9 406 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 ADGRE3Q9BY15 652 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 RXFP3Q9NSD7 469 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 LIN7CQ9NUP9 197 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 FZD4Q9ULV1 537 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 SLC12A4Q9UP95 1085 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 ZBTB1Q9Y2K1 713 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 INSL6Q9Y581 213 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 WNT6Q9Y6F9 365 aa6.35□□□□□ -1.39
SMARCE1-219ENST00000583294 E7EVH7 732 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 FAM155BO75949 473 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 HSD3B1P14060 373 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 WT1P19544 449 aaPredicted RBP6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 RXRAP19793 462 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 MAPK9P45984 424 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 AARSP49588 968 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 SOX10P56693 466 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 RPL15P61313 204 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 COL10A1Q03692 680 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 PDCLQ13371 301 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 ADCK5Q3MIX3 580 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 SYNE3Q6ZMZ3 975 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 DCDC5Q6ZRR9 648 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 LINC01465Q8N7H1 131 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 GCC1Q96CN9 775 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 CCDC17Q96LX7 622 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 ELOVL1Q9BW60 279 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 CDCP1Q9H5V8 836 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 KCNK9Q9NPC2 374 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 SAGE1Q9NXZ1 904 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 SERGEFQ9UGK8 458 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 FEM1BQ9UK73 627 aa6.34□□□□□ -1.39
SMARCE1-219ENST00000583294 TBC1D3DA0A087WVF3 549 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3IA0A087WXS9 549 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3EA0A087X179 549 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3KA0A087X1G2 549 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TCRBV5S1A1TA0A578 114 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3BA6NDS4 549 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3FA6NER0 549 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 AGAP5A6NIR3 686 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3LB9A6J9 549 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 NKX2-8O15522 239 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3HP0C7X1 549 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 CYP2D6P10635 497 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 GRK5P34947 590 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 WDR5P61964 334 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 GAB1Q13480 694 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 KCNB1Q14721 858 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TMEM119Q4V9L6 283 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 HSP90AB4PQ58FF6 505 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3GQ6DHY5 549 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3CQ6IPX1 549 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 KYAT3Q6YP21 454 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 C2CD5Q86YS7 1000 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 TBC1D3Q8IZP1 549 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 SARAFQ96BY9 339 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 KAZALD1Q96I82 304 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 CHODLQ9H9P2 273 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 SEMA4GQ9NTN9 838 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 RRN3Q9NYV6 651 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 NDUFAF4Q9P032 175 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 PCDHA10Q9Y5I2 948 aa6.33□□□□□ -1.4
SMARCE1-219ENST00000583294 EIF3FO00303 357 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 SLC3A2P08195 630 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 CYP21A2P08686 494 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 NHLRC4P0CG21 123 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 ATF7P17544 494 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 MATN1P21941 496 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 DUSP1P28562 367 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 VPS41P49754 854 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 AGTR2P50052 363 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 RBM5P52756 815 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 RBM6P78332 1123 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 CNGA3Q16281 694 aa6.32□□□□□ -1.4
SMARCE1-219ENST00000583294 TAF12Q16514 161 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms