RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 K7ESF4 209 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 ACSL4O60488 711 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 PAPSS2O95340 614 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 CYP1A1P04798 512 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 CCDC172P0C7W6 258 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 TDGF1P13385 188 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 GBP1P32455 592 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 GABRB2P47870 512 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 FNTBP49356 437 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 UBASH3AP57075 661 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 ZNF445P59923 1031 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 MRPS21P82921 87 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 DMWDQ09019 674 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 DMC1Q14565 340 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 NR1I3Q14994 352 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 ZC3H12AQ5D1E8 599 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 EMC10Q5UCC4 262 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 SYT13Q7L8C5 426 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 XYLT1Q86Y38 959 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 ALLCQ8N6M5 410 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 ZNF397Q8NF99 534 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 NKD2Q969F2 451 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 RNF34Q969K3 372 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 P2RY11Q96G91 374 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 SLC39A13Q96H72 371 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 HHIPQ96QV1 700 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 DDX50Q9BQ39 737 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 ZDHHC4Q9NPG8 344 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 PCDHGA2Q9Y5H1 932 aa13.1□□□□□ -0.31
SMARCE1-218ENST00000582955 A0A0A0MRY4 1105 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 GOLGA6L7A0A1B0GV03 622 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 KLF8O95600 359 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 IGLV3-25P01717 112 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 HOXC13P31276 330 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 NOS2P35228 1153 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 PXNP49023 591 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 MRE11P49959 708 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 NME3Q13232 169 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 ASIC2Q16515 512 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 FAM133BQ5BKY9 247 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 RFWD3Q6PCD5 774 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 MMS22LQ6ZRQ5 1243 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 ALYREFQ86V81 257 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 ZNF513Q8N8E2 541 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 TXNDC5Q8NBS9 432 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 ZBTB44Q8NCP5 570 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 SLC30A5Q8TAD4 765 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 BAP1Q92560 729 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 NELL1Q92832 810 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 AZIN2Q96A70 460 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 AGPAT1Q99943 283 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 C11orf70Q9BRQ4 267 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 SLC12A6Q9UHW9 1150 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 STAP1Q9ULZ2 295 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 MMP17Q9ULZ9 603 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 MYO6Q9UM54 1294 aa13.09□□□□□ -0.31
SMARCE1-218ENST00000582955 TYW5A2RUC4 315 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 PROB1E7EW31 1015 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 M0QYT0 321 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 TBL1XO60907 577 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 CISD3P0C7P0 127 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 MMP8P22894 467 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 HOXD9P28356 352 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 SLC6A4P31645 630 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 CCR1P32246 355 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 SCNN1AP37088 669 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 MATKP42679 507 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 KIR2DL1P43626 348 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 SULT1E1P49888 294 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 SGSHP51688 502 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 CLEC16AQ2KHT3 1053 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 EOGTQ5NDL2 527 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 NADSYN1Q6IA69 706 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 TRMT11Q7Z4G4 463 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 PHLDB2Q86SQ0 1253 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 LONP2Q86WA8 852 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 CHSY1Q86X52 802 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 ATP6V0D2Q8N8Y2 350 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 IL17RCQ8NAC3 791 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 TSTD1Q8NFU3 115 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 BTN2A3PQ96KV6 586 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 PCDHB18PQ96TA0 734 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 SLC2A11Q9BYW1 496 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 NUCKS1Q9H1E3 243 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 SEMA4AQ9H3S1 761 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 METTL5Q9NRN9 209 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 IFNKQ9P0W0 207 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 STIM2Q9P246 746 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 XPO7Q9UIA9 1087 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 FBXO10Q9UK96 956 aa13.08□□□□□ -0.32
SMARCE1-218ENST00000582955 CLEC4EQ9ULY5 219 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms