RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TRPV4Q9HBA0 871 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 TMEM51Q9NW97 253 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.9□□□□□ -0.82
RFFL-210ENST00000582308 GPATCH2LQ9NWQ4 482 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 ARHGEF38Q9NXL2 777 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 CFAP97Q9P2B7 532 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 XPO7Q9UIA9 1087 aaKnown RBP9.9□□□□□ -0.82
RFFL-210ENST00000582308 FZD10Q9ULW2 581 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 PACSIN2Q9UNF0 486 aaPredicted RBP9.9□□□□□ -0.82
RFFL-210ENST00000582308 SNX10Q9Y5X0 201 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 SCAMP3O14828 347 aaKnown RBP9.89□□□□□ -0.83
RFFL-210ENST00000582308 FANCGO15287 622 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 DDX3YO15523 660 aaKnown RBP9.89□□□□□ -0.83
RFFL-210ENST00000582308 PAGE1O75459 146 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 MOCS2O96007 188 aaPredicted RBP9.89□□□□□ -0.83
RFFL-210ENST00000582308 APOEP02649 317 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 RARAP10276 462 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 SLC2A3P11169 496 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 LAMP2P13473 410 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 FCARP24071 287 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 CTNNA2P26232 953 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 CORO1AP31146 461 aaKnown RBP9.89□□□□□ -0.83
RFFL-210ENST00000582308 GBP2P32456 591 aaPredicted RBP9.89□□□□□ -0.83
RFFL-210ENST00000582308 GJC1P36383 396 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 VIPR2P41587 438 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 TFF2Q03403 129 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 SCAPQ12770 1279 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 ZNF77Q15935 545 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 CA9Q16790 459 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 HADHQ16836 314 aaKnown RBP9.89□□□□□ -0.83
RFFL-210ENST00000582308 SMTNL2Q2TAL5 461 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 BOLA3Q53S33 107 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 KCNT1Q5JUK3 1230 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 ARTNQ5T4W7 220 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 LRRC38Q5VT99 294 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 TANGO2Q6ICL3 276 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 Q6ZNB5 142 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 HTR3DQ70Z44 454 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 DENND1CQ8IV53 801 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 UNC45BQ8IWX7 931 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 ST13P5Q8NFI4 369 aaPredicted RBP9.89□□□□□ -0.83
RFFL-210ENST00000582308 TEKT4Q8WW24 435 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 SMARCD2Q92925 531 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 NTAN1Q96AB6 310 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 ACSF2Q96CM8 615 aaPredicted RBP9.89□□□□□ -0.83
RFFL-210ENST00000582308 HES6Q96HZ4 224 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 SNRNP25Q9BV90 132 aaKnown RBP9.89□□□□□ -0.83
RFFL-210ENST00000582308 TLR10Q9BXR5 811 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 ZWILCHQ9H900 591 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 PCDHA3Q9Y5H8 950 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 UNC80Q8N2C7 3258 aa9.89□□□□□ -0.83
RFFL-210ENST00000582308 MIA3Q5JRA6 1907 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 GOLGA6L7A0A1B0GV03 622 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 E2F8A0AVK6 867 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 ENC1O14682 589 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 PSTPIP1O43586 416 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 ACSL4O60488 711 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 KRT7P08729 469 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 TCF3P15923 654 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 SP100P23497 879 aaPredicted RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 L1CAMP32004 1257 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 CTNNA1P35221 906 aaKnown RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 HARS2P49590 506 aaKnown RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 PEX5P50542 639 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 ARSEP51690 589 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 AIF1P55008 147 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 ETF1P62495 437 aaKnown RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 USP4Q13107 963 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 RPS6KA1Q15418 735 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 SMAD2Q15796 467 aaKnown RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 FAM133BQ5BKY9 247 aaKnown RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 PIK3R6Q5UE93 754 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 NUGGCQ68CJ6 796 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 NADSYN1Q6IA69 706 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 PTCRAQ6ISU1 281 aaPredicted RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 OTOP3Q7RTS5 596 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 POLNQ7Z5Q5 900 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 C14orf80Q86SX3 495 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 DDX42Q86XP3 938 aaKnown RBP eCLIP9.88□□□□□ -0.83
RFFL-210ENST00000582308 PSTKQ8IV42 348 aaKnown RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 RHOT1Q8IXI2 618 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 PYROXD2Q8N2H3 581 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 CELF5Q8N6W0 485 aaKnown RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 ATP6V0D2Q8N8Y2 350 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 RAPGEF5Q92565 580 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 HSPH1Q92598 858 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 ALG3Q92685 438 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 AZIN2Q96A70 460 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 BTN2A3PQ96KV6 586 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 C16orf45Q96MC5 204 aaPredicted RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 HAPLN3Q96S86 360 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 KCTD15Q96SI1 283 aaPredicted RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 PLA2G2FQ9BZM2 168 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 DCLK3Q9C098 648 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 SIK2Q9H0K1 926 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 OSBPL2Q9H1P3 480 aa9.88□□□□□ -0.83
RFFL-210ENST00000582308 DHX35Q9H5Z1 703 aaKnown RBP9.88□□□□□ -0.83
RFFL-210ENST00000582308 KLHL11Q9NVR0 708 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms