RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PRPF4O43172 522 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 FRS3O43559 492 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 MARCH6O60337 910 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 UGDHO60701 494 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 ZC3H11AO75152 810 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 WNT1P04628 370 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 TMEM225BP0DP42 221 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 BRAFP15056 766 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 ZNF84P51523 738 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 SLC29A2Q14542 456 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 KCNAB1Q14722 419 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 ACOX1Q15067 660 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 SLC4A8Q2Y0W8 1093 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 C3orf38Q5JPI3 329 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 PLAG1Q6DJT9 500 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 CCDC149Q6ZUS6 474 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 ELP5Q8TE02 316 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 GJA10Q969M2 543 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 STK31Q9BXU1 1019 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 FAM204AQ9H8W3 233 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 SACM1LQ9NTJ5 587 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 NCKIPSDQ9NZQ3 722 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 KLHL42Q9P2K6 505 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 L1RE1Q9UN81 338 aa4.02□□□□□ -1.77
SMCHD1-206ENST00000581631 SPATA31A5Q5VU36 1347 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 SPATA31A7Q8IWB4 1347 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 ISM1B1AKI9 464 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 RAB27BO00194 218 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 CBFA2T3O75081 653 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 WDR47O94967 919 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 BTF3P20290 206 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 HOXD12P35452 270 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 RPS16P62249 146 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 KCNJ12Q14500 433 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 GRM3Q14832 879 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 PGM5Q15124 567 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 PPP4R4Q6NUP7 873 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 TRILQ7L0X0 811 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 TRAPPC11Q7Z392 1133 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 C14orf80Q86SX3 495 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 NR2C2APQ86WQ0 139 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 ARL14EPQ8N8R7 260 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 FAM156AQ8NDB6 213 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 MBD3L2Q8NHZ7 208 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 SUN3Q8TAQ9 357 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 CELF1Q92879 486 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 EME1Q96AY2 570 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 WDR83Q9BRX9 315 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 AFF4Q9UHB7 1163 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 ANAPC4Q9UJX5 808 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 TPCN1Q9ULQ1 816 aa4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 HEMK1Q9Y5R4 338 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-206ENST00000581631 GOLGA6CA6NDK9 693 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 GOLGA6BA6NDN3 693 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 H0YGN5 161 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 TPP1O14773 563 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 GOLGA6DP0CG33 693 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 CHRNB1P11230 501 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 TPH1P17752 444 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 NDUFS1P28331 727 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 DUSP1P28562 367 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 MLH1P40692 756 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 RFX2P48378 723 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 CACNB3P54284 484 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 GAS1P54826 345 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 RPL36AP83881 106 aaKnown RBP4□□□□□ -1.77
SMCHD1-206ENST00000581631 DLGAP5Q15398 846 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 CNGA3Q16281 694 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 GFOD2Q3B7J2 385 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 RNF220Q5VTB9 566 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 NADSYN1Q6IA69 706 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 RTL10Q7L3V2 364 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 WDR75Q8IWA0 830 aaKnown RBP4□□□□□ -1.77
SMCHD1-206ENST00000581631 ADGRF4Q8IZF3 695 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 LRTOMTQ8WZ04 291 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 INPP5DQ92835 1189 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 PHF21BQ96EK2 531 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 WBP1Q96G27 269 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 SENP7Q9BQF6 1050 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 ZNF556Q9HAH1 456 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 GOLGA6AQ9NYA3 693 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 WNT16Q9UBV4 365 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 HDAC9Q9UKV0 1011 aa4□□□□□ -1.77
SMCHD1-206ENST00000581631 FRMPD2Q68DX3 1309 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 PPM1GO15355 546 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 IFNA2P01563 188 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 ACAA1P09110 424 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 ZKSCAN1P17029 563 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 ATF3P18847 181 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 RRP1P56182 461 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 DSCR9P59020 149 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 CNGA2Q16280 664 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 KIAA0753Q2KHM9 967 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 INO80DQ53TQ3 878 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 MZT2AQ6P582 158 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 UEVLDQ8IX04 471 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 TTC8Q8TAM2 541 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 LMO3Q8TAP4 145 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 ZNF845Q96IR2 970 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 FAM227BQ96M60 508 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms