RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 GLRX5Q86SX6 157 aa18.72■□□□□ 0.59
MKS1-209ENST00000580127 PIGZQ86VD9 579 aa18.72■□□□□ 0.59
MKS1-209ENST00000580127 ZCCHC9Q8N567 271 aaKnown RBP18.72■□□□□ 0.59
MKS1-209ENST00000580127 ENGASEQ8NFI3 743 aa18.72■□□□□ 0.59
MKS1-209ENST00000580127 WFIKKN2Q8TEU8 576 aa18.72■□□□□ 0.59
MKS1-209ENST00000580127 TMA16Q96EY4 203 aaKnown RBP18.72■□□□□ 0.59
MKS1-209ENST00000580127 CAMK1GQ96NX5 476 aa18.72■□□□□ 0.59
MKS1-209ENST00000580127 FBRSQ9HAH7 460 aa18.72■□□□□ 0.59
MKS1-209ENST00000580127 HBS1LQ9Y450 684 aaKnown RBP18.72■□□□□ 0.59
MKS1-209ENST00000580127 ATP6V1DQ9Y5K8 247 aa18.72■□□□□ 0.59
MKS1-209ENST00000580127 ATP5BP06576 529 aaKnown RBP18.71■□□□□ 0.59
MKS1-209ENST00000580127 MXI1P50539 228 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 AFF3P51826 1226 aaKnown RBP18.71■□□□□ 0.59
MKS1-209ENST00000580127 RAD23BP54727 409 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 SFSWAPQ12872 951 aaKnown RBP18.71■□□□□ 0.59
MKS1-209ENST00000580127 EDRF1Q3B7T1 1238 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 FNDC3BQ53EP0 1204 aaKnown RBP18.71■□□□□ 0.59
MKS1-209ENST00000580127 RAB41Q5JT25 222 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 PM20D1Q6GTS8 502 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 ZNF557Q8N988 423 aaPredicted RBP18.71■□□□□ 0.59
MKS1-209ENST00000580127 OR2T3Q8NH03 318 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 CCDC86Q9H6F5 360 aaKnown RBP18.71■□□□□ 0.59
MKS1-209ENST00000580127 TM7SF3Q9NS93 570 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 EIF2B4Q9UI10 523 aaKnown RBP18.71■□□□□ 0.59
MKS1-209ENST00000580127 KIAA1257Q9ULG3 409 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 HPSEQ9Y251 543 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 PCDHGB2Q9Y5G2 931 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 AKAP13Q12802 2813 aa18.71■□□□□ 0.59
MKS1-209ENST00000580127 BCAT1P54687 386 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 ZBTB16Q05516 673 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 RING1Q06587 406 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 HLA-BQ31612 363 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 SGO2Q562F6 1265 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 ADGRF1Q5T601 910 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 PROSER1Q86XN7 944 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 SLC4A11Q8NBS3 891 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 RHBDD1Q8TEB9 315 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 IRX2Q9BZI1 471 aaPredicted RBP18.7■□□□□ 0.58
MKS1-209ENST00000580127 CD93Q9NPY3 652 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 SUN2Q9UH99 717 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 PCOLCE2Q9UKZ9 415 aa18.7■□□□□ 0.58
MKS1-209ENST00000580127 KCNJ18B7U540 433 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 XPO1O14980 1071 aaKnown RBP18.69■□□□□ 0.58
MKS1-209ENST00000580127 FLRT2O43155 660 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 LATS1O95835 1130 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 MCCD1P59942 119 aaPredicted RBP18.69■□□□□ 0.58
MKS1-209ENST00000580127 SCAPQ12770 1279 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 DPYDQ12882 1025 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 CAMK2GQ13555 558 aaPredicted RBP18.69■□□□□ 0.58
MKS1-209ENST00000580127 TRIP4Q15650 581 aaPredicted RBP18.69■□□□□ 0.58
MKS1-209ENST00000580127 CCNI2Q6ZMN8 369 aaPredicted RBP18.69■□□□□ 0.58
MKS1-209ENST00000580127 FAM124AQ86V42 546 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 FMNL3Q8IVF7 1028 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 FAM217AQ8IXS0 508 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 SIX6OS1Q8N1H7 587 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 PNPLA1Q8N8W4 532 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 SNX19Q92543 992 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 GOLGA1Q92805 767 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 ARID3AQ99856 593 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 SCAND2PQ9GZW5 306 aaPredicted RBP18.69■□□□□ 0.58
MKS1-209ENST00000580127 LHX5Q9H2C1 402 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 ABCC13Q9NSE7 274 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 PKD1L2Q7Z442 2459 aa18.69■□□□□ 0.58
MKS1-209ENST00000580127 CD19P15391 556 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 PRKCHP24723 683 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 NDUFA8P51970 172 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 COPAP53621 1224 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 BST2Q10589 180 aaKnown RBP18.68■□□□□ 0.58
MKS1-209ENST00000580127 TTC31Q49AM3 519 aaPredicted RBP18.68■□□□□ 0.58
MKS1-209ENST00000580127 TCERG1LQ5VWI1 586 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 BSPRYQ5W0U4 402 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 KRBA2Q6ZNG9 492 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 CCDC117Q8IWD4 279 aaPredicted RBP18.68■□□□□ 0.58
MKS1-209ENST00000580127 UNC45BQ8IWX7 931 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 AHI1Q8N157 1196 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 SEMA4DQ92854 862 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 SKA1Q96BD8 255 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 TSG101Q99816 390 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 ULBP1Q9BZM6 244 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 BTBD1Q9H0C5 482 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 RMND1Q9NWS8 449 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 NCKAP1Q9Y2A7 1128 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 ANKRD11Q6UB99 2663 aaPredicted RBP18.68■□□□□ 0.58
MKS1-209ENST00000580127 KNL1Q8NG31 2342 aa18.68■□□□□ 0.58
MKS1-209ENST00000580127 DFNA5O60443 496 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 TSPAN3O60637 253 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 CBFA2T3O75081 653 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 DNTTP04053 509 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 POLR2EP19388 210 aaKnown RBP18.67■□□□□ 0.58
MKS1-209ENST00000580127 SLC11A2P49281 568 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 CSNK1EP49674 416 aaKnown RBP18.67■□□□□ 0.58
MKS1-209ENST00000580127 COL9A2Q14055 689 aaPredicted RBP18.67■□□□□ 0.58
MKS1-209ENST00000580127 GOLGA7BQ2TAP0 167 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 CHST9Q7L1S5 443 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 GALNT15Q8N3T1 639 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 SORCS1Q8WY21 1168 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 TATDN2Q93075 761 aa18.67■□□□□ 0.58
MKS1-209ENST00000580127 DDX50Q9BQ39 737 aaKnown RBP18.67■□□□□ 0.58
MKS1-209ENST00000580127 GTPBP4Q9BZE4 634 aaKnown RBP18.67■□□□□ 0.58
MKS1-209ENST00000580127 OSGEPQ9NPF4 335 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms