RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 WDR59Q6PJI9 974 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 LCLAT1Q6UWP7 414 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 GAREM2Q75VX8 874 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 RTL10Q7L3V2 364 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 ENOSF1Q7L5Y1 443 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 VN1R5Q7Z5H4 357 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 IRF2BP2Q7Z5L9 587 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 NOP9Q86U38 636 aaKnown RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 PPFIBP1Q86W92 1011 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 VSTM4Q8IW00 320 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 ETFBKMTQ8IXQ9 262 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 PPM1KQ8N3J5 372 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 RBBP8NLQ8NC74 664 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 OR6B3Q8NGW1 331 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 RIN3Q8TB24 985 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC7A14Q8TBB6 771 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SPPL2BQ8TCT7 592 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC2A14Q8TDB8 520 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 C2orf15Q8WU43 125 aaKnown RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC20A1Q8WUM9 679 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 CASP10Q92851 521 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 PSMG2Q969U7 264 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 TRMT2BQ96GJ1 504 aaKnown RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 TMEM176AQ96HP8 235 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SPATA17Q96L03 361 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 C8orf48Q96LL4 319 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 KCNK16Q96T55 309 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 MMS19Q96T76 1030 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 LSM14BQ9BX40 385 aaKnown RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 NT5C1AQ9BXI3 368 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 EMILIN2Q9BXX0 1053 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 ADAM7Q9H2U9 754 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 POMKQ9H5K3 350 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SFXN1Q9H9B4 322 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 ZFYVE1Q9HBF4 777 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 UBE2TQ9NPD8 197 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 RAD18Q9NS91 495 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 FAM207AQ9NSI2 230 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 FAM49BQ9NUQ9 324 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 HCFC1R1Q9NWW0 138 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 ZDHHC7Q9NXF8 308 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 IFNKQ9P0W0 207 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 DNMT3BQ9UBC3 853 aaKnown RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 TJP2Q9UDY2 1190 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SALL4Q9UJQ4 1053 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 DAAM1Q9Y4D1 1078 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 USP15Q9Y4E8 981 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 PCDHB5Q9Y5E4 795 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 CUL9Q8IWT3 2517 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 F5P12259 2224 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 LRRK1Q38SD2 2015 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 CCDC195A0A1B0GUA6 201 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 A0A1W2PQJ5 194 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC38A8A6NNN8 435 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 LOC730098B7Z3J9 87 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 F8VP50 259 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 H3BQ06 376 aaPredicted RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 CCL16O15467 120 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 NCK2O43639 380 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 CYP1A1P04798 512 aaPredicted RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 FYNP06241 537 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 VDRP11473 427 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 SRFP11831 508 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 P4HA1P13674 534 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 IL9P15248 144 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 CYP11B1P15538 503 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 NPR3P17342 541 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 HOXB8P17481 243 aaPredicted RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 KCNA5P22460 613 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 BDNFP23560 247 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 SOX5P35711 763 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 PRKCIP41743 596 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF75DP51815 510 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 OXCT1P55809 520 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 ARPP19P56211 112 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 UBASH3AP57075 661 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 POLR2FP61218 127 aaKnown RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 NOMO3P69849 1222 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 ZXDBP98169 803 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 TSPY1Q01534 308 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 FMO1Q01740 532 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 UBXN1Q04323 297 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 PDE4CQ08493 712 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 TWF1Q12792 350 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 SMARCB1Q12824 385 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 EIF4EBP2Q13542 120 aaPredicted RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 CBX2Q14781 532 aaPredicted RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 SMAD2Q15796 467 aaKnown RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 CNGA2Q16280 664 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 NFE2Q16621 373 aaPredicted RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 DDR2Q16832 855 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 ARHGAP44Q17R89 818 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 GOLGA7BQ2TAP0 167 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 ASTE1Q2TB18 679 aaPredicted RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF394Q53GI3 561 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 COX20Q5RI15 118 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 RARS2Q5T160 578 aaKnown RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 STXBP5Q5T5C0 1151 aa4□□□□□ -1.77
SMARCE1-215ENST00000578995 OTUD1Q5VV17 481 aaPredicted RBP4□□□□□ -1.77
SMARCE1-215ENST00000578995 SNX30Q5VWJ9 437 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms