RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 ALKBH5Q6P6C2 394 aaKnown RBP15.99■□□□□ 0.15
IFT20-208ENST00000578985 SND1Q7KZF4 910 aaKnown RBP eCLIP15.99■□□□□ 0.15
IFT20-208ENST00000578985 SUGP1Q8IWZ8 645 aaKnown RBP15.99■□□□□ 0.15
IFT20-208ENST00000578985 CPXM2Q8N436 756 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 ATP6V0D2Q8N8Y2 350 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 EXOC4Q96A65 974 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 ZNF653Q96CK0 615 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 PGAP3Q96FM1 320 aaPredicted RBP15.99■□□□□ 0.15
IFT20-208ENST00000578985 CFAP57Q96MR6 1250 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 LRFN3Q9BTN0 628 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 BBS2Q9BXC9 721 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 ADAM33Q9BZ11 813 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 DEF6Q9H4E7 631 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 PARVAQ9NVD7 372 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 TMEM51Q9NW97 253 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.99■□□□□ 0.15
IFT20-208ENST00000578985 MARK1Q9P0L2 795 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 CNOT8Q9UFF9 292 aaKnown RBP15.99■□□□□ 0.15
IFT20-208ENST00000578985 SLC12A6Q9UHW9 1150 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 STOML2Q9UJZ1 356 aa15.99■□□□□ 0.15
IFT20-208ENST00000578985 MTF2Q9Y483 593 aaPredicted RBP15.99■□□□□ 0.15
IFT20-208ENST00000578985 ATG2BQ96BY7 2078 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 KCNU1A8MYU2 1149 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 NEDD8-MDP1E9PL57 170 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 TRDMT1O14717 391 aaKnown RBP15.98■□□□□ 0.15
IFT20-208ENST00000578985 ATMINO43313 823 aaPredicted RBP15.98■□□□□ 0.15
IFT20-208ENST00000578985 MYBL1P10243 752 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 GPD1P21695 349 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 SDC4P31431 198 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 CCR1P32246 355 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 OPRD1P41143 372 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 GALK1P51570 392 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 MAMLD1Q13495 774 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 PPP2R5DQ14738 602 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 SLC18A3Q16572 532 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 ASTE1Q2TB18 679 aaPredicted RBP15.98■□□□□ 0.15
IFT20-208ENST00000578985 CCDC14Q49A88 953 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 PPP1R15BQ5SWA1 713 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 NAIF1Q69YI7 327 aaPredicted RBP15.98■□□□□ 0.15
IFT20-208ENST00000578985 PLEKHA7Q6IQ23 1121 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 DCUN1D2Q6PH85 259 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 PJA1Q8NG27 643 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 CD101Q93033 1021 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 BTN2A3PQ96KV6 586 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 MCEEQ96PE7 176 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 P2RY13Q9BPV8 354 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 DDX50Q9BQ39 737 aaKnown RBP15.98■□□□□ 0.15
IFT20-208ENST00000578985 OSBPL6Q9BZF3 934 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 NHEJ1Q9H9Q4 299 aaPredicted RBP15.98■□□□□ 0.15
IFT20-208ENST00000578985 PIGVQ9NUD9 493 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 CALCOCO1Q9P1Z2 691 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 NENFQ9UMX5 172 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 SIT1Q9Y3P8 196 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 ZDBF2Q9HCK1 2354 aa15.98■□□□□ 0.15
IFT20-208ENST00000578985 KIAA1549LQ6ZVL6 1849 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 GOLGA6L7A0A1B0GV03 622 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 PI15O43692 258 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 AKR1B10O60218 316 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 TSPAN3O60637 253 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 CYBBP04839 570 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 AOC1P19801 751 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 ABCB4P21439 1286 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 RDXP35241 583 aaKnown RBP15.97■□□□□ 0.15
IFT20-208ENST00000578985 PTPN9P43378 593 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 SLC6A11P48066 632 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 CXCR3P49682 368 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 RPL7AP62424 266 aaKnown RBP15.97■□□□□ 0.15
IFT20-208ENST00000578985 ATP11AP98196 1134 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 GFPT1Q06210 699 aaPredicted RBP15.97■□□□□ 0.15
IFT20-208ENST00000578985 GRSF1Q12849 480 aaKnown RBP eCLIP15.97■□□□□ 0.15
IFT20-208ENST00000578985 MTA1Q13330 715 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 FAM133BQ5BKY9 247 aaKnown RBP15.97■□□□□ 0.15
IFT20-208ENST00000578985 NADSYN1Q6IA69 706 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 BNIPLQ7Z465 357 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 CCDC105Q8IYK2 499 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 ZNF687Q8N1G0 1237 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 NAT16Q8N8M0 369 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 BHMTQ93088 406 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 CCDC42Q96M95 316 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 WDCPQ9H6R7 721 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 MYO1AQ9UBC5 1043 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 XPO7Q9UIA9 1087 aaKnown RBP15.97■□□□□ 0.15
IFT20-208ENST00000578985 PAXBP1Q9Y5B6 917 aa15.97■□□□□ 0.15
IFT20-208ENST00000578985 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.96■□□□□ 0.15
IFT20-208ENST00000578985 GFRA2O00451 464 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 NCAM2O15394 837 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 ENDOD1O94919 500 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 PENKP01210 267 aaPredicted RBP15.96■□□□□ 0.15
IFT20-208ENST00000578985 TYRP14679 529 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 SLC6A4P31645 630 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 ATXN1P54253 815 aaKnown RBP15.96■□□□□ 0.15
IFT20-208ENST00000578985 CDO1Q16878 200 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 C15orf59Q2T9L4 293 aaPredicted RBP15.96■□□□□ 0.15
IFT20-208ENST00000578985 MPPE1Q53F39 396 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 TMEM196Q5HYL7 178 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 BRMS1LQ5PSV4 323 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 FSTL4Q6MZW2 842 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 RFWD3Q6PCD5 774 aa15.96■□□□□ 0.15
IFT20-208ENST00000578985 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.96■□□□□ 0.15
IFT20-208ENST00000578985 C12orf40Q86WS4 652 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms