RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 ZCCHC9Q8N567 271 aaKnown RBP9.34□□□□□ -0.91
GGA3-207ENST00000578896 UBR7Q8N806 425 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 RBBP8NLQ8NC74 664 aaPredicted RBP9.34□□□□□ -0.91
GGA3-207ENST00000578896 CEP76Q8TAP6 659 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 CLEC4CQ8WTT0 213 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 TSG101Q99816 390 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 ZSWIM1Q9BR11 485 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 TMEM121BQ9BXQ6 578 aaPredicted RBP9.34□□□□□ -0.91
GGA3-207ENST00000578896 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 MTG2Q9H4K7 406 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 SLC32A1Q9H598 525 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 WSB2Q9NYS7 404 aaPredicted RBP9.34□□□□□ -0.91
GGA3-207ENST00000578896 KLK13Q9UKR3 277 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 ZNF510Q9Y2H8 683 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 SLCO1B1Q9Y6L6 691 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 DOCK9Q9BZ29 2069 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 FASNP49327 2511 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 MEI4A8MW99 385 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 O00370 1275 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 XPO1O14980 1071 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 STX10O60499 249 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 SYNCRIPO60506 623 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 CYBBP04839 570 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 NCAM1P13591 858 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 BRD2P25440 801 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 HOXD9P28356 352 aaPredicted RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 HLA-FP30511 346 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 NUMBP49757 651 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 TPMTP51580 245 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 COPAP53621 1224 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 BCAT1P54687 386 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 SLC8A3P57103 927 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 FKBP3Q00688 224 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 BST2Q10589 180 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 TRIP4Q15650 581 aaPredicted RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 DCAF12L1Q5VU92 463 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 KLHL10Q6JEL2 608 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 PMF1Q6P1K2 205 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 RFWD3Q6PCD5 774 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 TMEM270Q6UE05 265 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 ANKS1BQ7Z6G8 1248 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 ZC3H3Q8IXZ2 948 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 ARHGAP18Q8N392 663 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 CPXM2Q8N436 756 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 PNPLA1Q8N8W4 532 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 ENGASEQ8NFI3 743 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 WFDC5Q8TCV5 224 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 RNF139Q8WU17 664 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 UCMAQ8WVF2 138 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 SMARCE1Q969G3 411 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 SLC35C1Q96A29 364 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 MYEOVQ96EZ4 313 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 SIPA1Q96FS4 1042 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 IPO9Q96P70 1041 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 CDK5RAP1Q96SZ6 601 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 DNAI2Q9GZS0 605 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 IL21RQ9HBE5 538 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 ITM2CQ9NQX7 267 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 USP36Q9P275 1121 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 HESX1Q9UBX0 185 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 ARMCX3Q9UH62 379 aaPredicted RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 COQ4Q9Y3A0 265 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 PCDHB4Q9Y5E5 795 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 ATP6V1DQ9Y5K8 247 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 URB1O60287 2271 aaKnown RBP9.33□□□□□ -0.92
GGA3-207ENST00000578896 PLXNB3Q9ULL4 1909 aa9.33□□□□□ -0.92
GGA3-207ENST00000578896 FREM2Q5SZK8 3169 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 TMEM131Q92545 1883 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 SLC16A3O15427 465 aaKnown RBP9.32□□□□□ -0.92
GGA3-207ENST00000578896 TBL1XO60907 577 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 SYPP08247 313 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 VDRP11473 427 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 HOXD12P35452 270 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 DPP6P42658 865 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 FMO5P49326 533 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 HARS2P49590 506 aaKnown RBP9.32□□□□□ -0.92
GGA3-207ENST00000578896 STX17P56962 302 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 DAOAP59103 153 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 BNC1Q01954 994 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 ARID5AQ03989 594 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 GRIK2Q13002 908 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 ENPP2Q13822 863 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 PKDCCQ504Y2 493 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 FNDC3BQ53EP0 1204 aaKnown RBP9.32□□□□□ -0.92
GGA3-207ENST00000578896 MPPE1Q53F39 396 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 SYCP2LQ5T4T6 812 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 SERPINA13PQ6UXR4 307 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 CHST9Q7L1S5 443 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 RRAGAQ7L523 313 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 ADIPOR2Q86V24 386 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 ARHGEF19Q8IW93 802 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 FAM217AQ8IXS0 508 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 SIX6OS1Q8N1H7 587 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 TTC39CQ8N584 583 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 SNX19Q92543 992 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 PRCCQ92733 491 aaPredicted RBP9.32□□□□□ -0.92
GGA3-207ENST00000578896 GATA6Q92908 595 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 PLD4Q96BZ4 506 aa9.32□□□□□ -0.92
GGA3-207ENST00000578896 TMA16Q96EY4 203 aaKnown RBP9.32□□□□□ -0.92
GGA3-207ENST00000578896 FAXDC2Q96IV6 333 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms