RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 RBP3P10745 1247 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 ALADP13716 330 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 PECAM1P16284 738 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 STIP1P31948 543 aaKnown RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 ADRA1BP35368 520 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 PBX3P40426 434 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 ATP5OP48047 213 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 VPS41P49754 854 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 ZNF135P52742 658 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 RPL10AP62906 217 aaKnown RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 PITX1P78337 314 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 IFRD2Q12894 506 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 PUS10Q3MIT2 529 aaKnown RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 RTP2Q5QGT7 225 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 KIAA1841Q6NSI8 718 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 DARS2Q6PI48 645 aaKnown RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 KCNT2Q6UVM3 1135 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 BZW1Q7L1Q6 419 aaKnown RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 TMC3Q7Z5M5 1100 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 CMTR2Q8IYT2 770 aaKnown RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 PQLC3Q8N755 202 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 PLD5Q8N7P1 536 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 PCDH19Q8TAB3 1148 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 SCAMP5Q8TAC9 235 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 RNF139Q8WU17 664 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 IGSF21Q96ID5 467 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 B3GALT6Q96L58 329 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 PGLYRP2Q96PD5 576 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 CSPG4P5Q96PW8 444 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 FOXP3Q9BZS1 431 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 PIGVQ9NUD9 493 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 CALCOCO1Q9P1Z2 691 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 SAE1Q9UBE0 346 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-218ENST00000578469 FBXW11Q9UKB1 542 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 SCML2Q9UQR0 700 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 FAM50BQ9Y247 325 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 BACE2Q9Y5Z0 518 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 NLRC5Q86WI3 1866 aa17.56■□□□□ 0.4
SREBF1-218ENST00000578469 MTMR11A4FU01 709 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 PPFIA2O75334 1257 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 RTN3O95197 1032 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-218ENST00000578469 IFNB1P01574 187 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 LAG3P18627 525 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 IVDP26440 423 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 NR2C2P49116 596 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 CXCR3P49682 368 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 ITGA8P53708 1063 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 FAM193AP78312 1265 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 SCAPQ12770 1279 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 BTG3Q14201 252 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-218ENST00000578469 DDR2Q16832 855 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 KCTD19Q17RG1 926 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-218ENST00000578469 IZUMO3Q5VZ72 239 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 PCGF5Q86SE9 256 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 MON1AQ86VX9 555 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 BCL7CQ8WUZ0 217 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-218ENST00000578469 UBLCP1Q8WVY7 318 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-218ENST00000578469 RNF34Q969K3 372 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 ZNF689Q96CS4 500 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-218ENST00000578469 SAMD11Q96NU1 681 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 TMEM121Q9BTD3 319 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 WDCPQ9H6R7 721 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 PTPRDP23468 1912 aa17.55■□□□□ 0.4
SREBF1-218ENST00000578469 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 DNALI1O14645 258 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 HAPLN1P10915 354 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 HSD17B3P37058 310 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 PMS2P54278 862 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 GPS1Q13098 491 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 XRCC4Q13426 336 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 PSMD5Q16401 504 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 P3H1Q32P28 736 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 MGAT5BQ3V5L5 792 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 PTCRAQ6ISU1 281 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 NPNTQ6UXI9 565 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 LRIG3Q6UXM1 1119 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 TAS1R1Q7RTX1 841 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 TAC4Q86UU9 113 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 TMEM173Q86WV6 379 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 CDKL3Q8IVW4 592 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 ATAD1Q8NBU5 361 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 ADAM32Q8TC27 787 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 DQX1Q8TE96 717 aaKnown RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 RIN2Q8WYP3 895 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 PIK3R5Q8WYR1 880 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 MRPL38Q96DV4 380 aaKnown RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 TMEM169Q96HH4 297 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 SPATA17Q96L03 361 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 WDR6Q9NNW5 1121 aaKnown RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 CWC15Q9P013 229 aaKnown RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 MTRRQ9UBK8 725 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 TPX2Q9ULW0 747 aaKnown RBP17.54■□□□□ 0.4
SREBF1-218ENST00000578469 ATP8A1Q9Y2Q0 1164 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 HEY1Q9Y5J3 304 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 PATJQ8NI35 1801 aa17.54■□□□□ 0.4
SREBF1-218ENST00000578469 EEF2KO00418 725 aaKnown RBP17.53■□□□□ 0.4
SREBF1-218ENST00000578469 ZNF189O75820 626 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-218ENST00000578469 EFEMP2O95967 443 aa17.53■□□□□ 0.4
SREBF1-218ENST00000578469 GOT1P17174 413 aa17.53■□□□□ 0.4
SREBF1-218ENST00000578469 YWHAQP27348 245 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms