RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 ATP11AP98196 1134 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 NME3Q13232 169 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 PDGFRLQ15198 375 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 RNF43Q68DV7 783 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 C11orf63Q6NUN7 778 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 SND1Q7KZF4 910 aaKnown RBP eCLIP13.19□□□□□ -0.3
MKS1-206ENST00000577824 CPXM2Q8N436 756 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 SLC44A3Q8N4M1 653 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 RSAD2Q8WXG1 361 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 DNASE1L2Q92874 299 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 PRMT1Q99873 361 aaKnown RBP13.19□□□□□ -0.3
MKS1-206ENST00000577824 RPP25Q9BUL9 199 aaKnown RBP13.19□□□□□ -0.3
MKS1-206ENST00000577824 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 ANLNQ9NQW6 1124 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 THG1LQ9NWX6 298 aaKnown RBP13.19□□□□□ -0.3
MKS1-206ENST00000577824 LIMD1Q9UGP4 676 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 TFR2Q9UP52 801 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 SH3BP1Q9Y3L3 701 aa13.19□□□□□ -0.3
MKS1-206ENST00000577824 HMBSP08397 361 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 IRF1P10914 325 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 NRG1Q02297 640 aaPredicted RBP13.18□□□□□ -0.3
MKS1-206ENST00000577824 SLC25A11Q02978 314 aaKnown RBP13.18□□□□□ -0.3
MKS1-206ENST00000577824 KIF5AQ12840 1032 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 TDGQ13569 410 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 CDO1Q16878 200 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 EML3Q32P44 896 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 FAM133BQ5BKY9 247 aaKnown RBP13.18□□□□□ -0.3
MKS1-206ENST00000577824 ZC3H12AQ5D1E8 599 aaKnown RBP13.18□□□□□ -0.3
MKS1-206ENST00000577824 ARTNQ5T4W7 220 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 NADSYN1Q6IA69 706 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 KIAA1328Q86T90 577 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 FAM131BQ86XD5 332 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 PSTKQ8IV42 348 aaKnown RBP13.18□□□□□ -0.3
MKS1-206ENST00000577824 BBS7Q8IWZ6 715 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 ATP6V0D2Q8N8Y2 350 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 ATP2A3Q93084 1043 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 TRMT61BQ9BVS5 477 aaKnown RBP13.18□□□□□ -0.3
MKS1-206ENST00000577824 TKTL2Q9H0I9 626 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 WDCPQ9H6R7 721 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 SLC2A4RGQ9NR83 387 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 MARK1Q9P0L2 795 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 DUSP12Q9UNI6 340 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 PPP2R2CQ9Y2T4 447 aa13.18□□□□□ -0.3
MKS1-206ENST00000577824 A0A0U1RQJ8 604 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 ACSL4O60488 711 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 RNF8O76064 485 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 ASGR2P07307 311 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 SRFP11831 508 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 SLC1A1P43005 524 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 SLC11A2P49281 568 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 GRM2Q14416 872 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 C5orf22Q49AR2 442 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 ADGRF1Q5T601 910 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 PIK3R6Q5UE93 754 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 MANEALQ5VSG8 457 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
MKS1-206ENST00000577824 DENND1CQ8IV53 801 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 RNF10Q8N5U6 811 aaKnown RBP13.17□□□□□ -0.3
MKS1-206ENST00000577824 LRRC57Q8N9N7 239 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 ATRIPQ8WXE1 791 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 BTBD6Q96KE9 485 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 C1orf74Q96LT6 269 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 PEBP4Q96S96 227 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 HPS4Q9NQG7 708 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 DUS2Q9NX74 493 aaKnown RBP13.17□□□□□ -0.3
MKS1-206ENST00000577824 XPO7Q9UIA9 1087 aaKnown RBP13.17□□□□□ -0.3
MKS1-206ENST00000577824 SORCS3Q9UPU3 1222 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 WNT6Q9Y6F9 365 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 DUSP10Q9Y6W6 482 aa13.17□□□□□ -0.3
MKS1-206ENST00000577824 SYNJ2BP-COX16A0A087WUM0 186 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 HOXC11O43248 304 aaPredicted RBP13.16□□□□□ -0.3
MKS1-206ENST00000577824 KRT86O43790 486 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
MKS1-206ENST00000577824 NFATC1O95644 943 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 MIPP30301 263 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 GDI1P31150 447 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 ADRA1BP35368 520 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 CHKAP35790 457 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 IFNAR2P48551 515 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 MLLT6P55198 1093 aaPredicted RBP13.16□□□□□ -0.3
MKS1-206ENST00000577824 SEMA3BQ13214 749 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 ARL13BQ3SXY8 428 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 MS4A13Q5J8X5 152 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 MPP7Q5T2T1 576 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 POLNQ7Z5Q5 900 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 YAF2Q8IY57 180 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 ZNF683Q8IZ20 524 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 ADGRG2Q8IZP9 1017 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 GJD3Q8N144 294 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 ST13P5Q8NFI4 369 aaPredicted RBP13.16□□□□□ -0.3
MKS1-206ENST00000577824 TPCN2Q8NHX9 752 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 TEKT4Q8WW24 435 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 IRF7Q92985 503 aa13.16□□□□□ -0.3
MKS1-206ENST00000577824 PRICKLE1Q96MT3 831 aaPredicted RBP13.16□□□□□ -0.3
MKS1-206ENST00000577824 ZNF830Q96NB3 372 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms