RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SPATA16Q9BXB7 569 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 RNPEPQ9H4A4 650 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 SIX2Q9NPC8 291 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 XPNPEP3Q9NQH7 507 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 DDX4Q9NQI0 724 aaKnown RBP13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 CCDC167Q9P0B6 97 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 RABGEF1Q9UJ41 708 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 PLA2G4CQ9UP65 541 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 ABCC6O95255 1503 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 IL1R1P14778 569 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 AMPD1P23109 780 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 YY1P25490 414 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 RPL14P50914 215 aaKnown RBP13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 PRKAA2P54646 552 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 MAP3K10Q02779 954 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 DCAF12L1Q5VU92 463 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 ADGRD1Q6QNK2 874 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 TMC7Q7Z402 723 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 SYT15Q9BQS2 421 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 C17orf80Q9BSJ5 609 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 C9orf16Q9BUW7 83 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 RIC8BQ9NVN3 520 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 LNPEPQ9UIQ6 1025 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 TSR3Q9UJK0 312 aaKnown RBP13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 VANGL2Q9ULK5 521 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 SUPT3HB4E1H0 165 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 INPP4BO15327 924 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 LYPLA1O75608 230 aaPredicted RBP13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 TCEA3O75764 348 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 LAMC2Q13753 1193 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 MAGED4Q96JG8 741 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 GIMAP4Q9NUV9 329 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 TRMUO75648 421 aaKnown RBP13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 WDR47O94967 919 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 BPGMP07738 259 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 GRIK5Q16478 980 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 RGS21Q2M5E4 152 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 NPNTQ6UXI9 565 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 FAM131BQ86XD5 332 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 CAMK1DQ8IU85 385 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLC44A1Q8WWI5 657 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 DCUN1D1Q96GG9 259 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 SSU72Q9NP77 194 aaKnown RBP13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 PRMT7Q9NVM4 692 aaPredicted RBP13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 PLLPQ9Y342 182 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 SH3GLB1Q9Y371 365 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 CNTNAP4Q9C0A0 1308 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 HMGCRP04035 888 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 CDC16Q13042 620 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLC15A2Q16348 729 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 EFL1Q7Z2Z2 1120 aaKnown RBP13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 HPS6Q86YV9 775 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 ACMSDQ8TDX5 336 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 HTR3CQ8WXA8 447 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 CEP41Q9BYV8 373 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 NDEL1Q9GZM8 345 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 TMX2Q9Y320 296 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 ADGRA2Q96PE1 1338 aa13.45□□□□□ -0.26
PCDHGB3-201ENST00000576222 RARBP10826 455 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 HMGCS2P54868 508 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 KCNT2Q6UVM3 1135 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 APPL2Q8NEU8 664 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 SNX19Q92543 992 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 C7orf26Q96N11 449 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 UNKQ9C0B0 810 aaKnown RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 PRPF19Q9UMS4 504 aaKnown RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 HBS1LQ9Y450 684 aaKnown RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 SIGLEC16A6NMB1 481 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 DISP2A7MBM2 1401 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 PMPCBO75439 489 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 GRIK3Q13003 919 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 NAB1Q13506 487 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 CSHL1Q14406 222 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 LPIN1Q14693 890 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ANGEL2Q5VTE6 544 aaKnown RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 TRAF7Q6Q0C0 670 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ACOT1Q86TX2 421 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 SEMA4DQ92854 862 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 FAXDC2Q96IV6 333 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZDHHC15Q96MV8 337 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 FAM193BQ96PV7 902 aaPredicted RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 SEPHS2Q99611 448 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 C1orf50Q9BV19 199 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 THUMPD3Q9BV44 507 aaKnown RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 UBE2OQ9C0C9 1292 aaKnown RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 EBF3Q9H4W6 596 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZNF408Q9H9D4 720 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 COG4Q9H9E3 785 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 PNPLA3Q9NST1 481 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 AJAP1Q9UKB5 411 aaPredicted RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ITGA11Q9UKX5 1188 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 MYH8P13535 1937 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 M0QYT0 321 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 LDLRP01130 860 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 BFSP2Q13515 415 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 TRIM74Q86UV6 250 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 TRIM73Q86UV7 250 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLC25A23Q9BV35 468 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms