RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CLIC2O15247 247 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 EIF5BO60841 1220 aaKnown RBP17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 FAM200BP0CF97 657 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 GLDCP23378 1020 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 HOXD13P35453 343 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 TXLNAP40222 546 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 RPS14P62263 151 aaKnown RBP17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 BIRC3Q13489 604 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 LY6DQ14210 128 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 SHBQ15464 509 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 ZNF699Q32M78 642 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 TBC1D25Q3MII6 688 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 ZNF667Q5HYK9 610 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 ARHGAP40Q5TG30 622 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 TADA2BQ86TJ2 420 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 ERICH1Q86X53 443 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 DENND1CQ8IV53 801 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 CCDC65Q8IXS2 484 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 SAP25Q8TEE9 199 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 SKA1Q96BD8 255 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 SGK2Q9HBY8 427 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 CPNE5Q9HCH3 593 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 RASAL2Q9UJF2 1139 aa17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 AGO1Q9UL18 857 aaKnown RBP17.07■□□□□ 0.32
CTDNEP1-211ENST00000575783 COL12A1Q99715 3063 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 IGHV4-34P06331 123 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 NDST1P52848 882 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 COG7P83436 770 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 RHDQ02161 417 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 EFEMP1Q12805 493 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 KIAA0895LQ68EN5 471 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 TSC1Q92574 1164 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 SLC2A11Q9BYW1 496 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 DCLK3Q9C098 648 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 AASDHPPTQ9NRN7 309 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 AGPAT3Q9NRZ7 376 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 CLCA2Q9UQC9 943 aa17.06■□□□□ 0.32
CTDNEP1-211ENST00000575783 SPTA1P02549 2419 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 HHLA1C9JL84 531 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 WNT1P04628 370 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 RALAP11233 206 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 STAT6P42226 847 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 CASP4P49662 377 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 ZBTB16Q05516 673 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 BMT2Q1RMZ1 405 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 TTC31Q49AM3 519 aaPredicted RBP17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 BROXQ5VW32 411 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 CLEC20AQ6ZU45 233 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 SCD5Q86SK9 330 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 WBP1Q96G27 269 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 GZF1Q9H116 711 aaPredicted RBP17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 TMEM245Q9H330 911 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 PRSS16Q9NQE7 514 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 HMGXB4Q9UGU5 601 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 NCKAP1Q9Y2A7 1128 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 PCDHA5Q9Y5H7 936 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 CLIC4Q9Y696 253 aa17.05■□□□□ 0.32
CTDNEP1-211ENST00000575783 A0A1W2PPC4 97 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 KIF20AO95235 890 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 WISP1O95388 367 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 C6P13671 934 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 TMPRSS3P57727 454 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 BNIP3Q12983 259 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 KDM7AQ6ZMT4 941 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 CCDC73Q6ZRK6 1079 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 CRYBG2Q8N1P7 616 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 XXYLT1Q8NBI6 393 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 ZNF248Q8NDW4 579 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 VRTNQ9H8Y1 702 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 GDF3Q9NR23 364 aa17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 FBXO2Q9UK22 296 aaPredicted RBP17.04■□□□□ 0.32
CTDNEP1-211ENST00000575783 NUMA1Q14980 2115 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 TGFB1I1O43294 461 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 SLC28A2O43868 658 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 KRT10P13645 584 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 CKMT2P17540 419 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 ARRB1P49407 418 aaPredicted RBP17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 PSEN1P49768 467 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 ILKQ13418 452 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 NCOA4Q13772 614 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 CHST9Q7L1S5 443 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 BRAPQ7Z569 592 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 NELFCDQ8IXH7 590 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 EBF2Q9HAK2 575 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 SRPRBQ9Y5M8 271 aaKnown RBP17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 TMEM131Q92545 1883 aa17.03■□□□□ 0.32
CTDNEP1-211ENST00000575783 WNT9AO14904 365 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 YKT6O15498 198 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 CD38P28907 300 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 EPHA8P29322 1005 aaPredicted RBP17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 HLA-FP30511 346 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 KIF11P52732 1056 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 GALCP54803 685 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 UCNP55089 124 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 PCBP4P57723 403 aaKnown RBP17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 INSM1Q01101 510 aaPredicted RBP17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 PKDCCQ504Y2 493 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 ZNF776Q68DI1 518 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms