RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 DPYSL2Q16555 572 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 TMEM184AQ6ZMB5 413 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 PSTKQ8IV42 348 aaKnown RBP24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 LEMD2Q8NC56 503 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 ACTRT1Q8TDG2 376 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 MTMR10Q9NXD2 777 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 SMPD4Q9NXE4 827 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 XPO7Q9UIA9 1087 aaKnown RBP24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 HBS1LQ9Y450 684 aaKnown RBP24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 SNX10Q9Y5X0 201 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 DENND4CQ5VZ89 1909 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 MBL2P11226 248 aaPredicted RBP24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 KRT10P13645 584 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 HDCP19113 662 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 KCNQ1P51787 676 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 PRSS36Q5K4E3 855 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 ADAT2Q7Z6V5 191 aaKnown RBP24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 GKN1Q9NS71 199 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 NOTCH4Q99466 2003 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 PRRC2BQ5JSZ5 2229 aaKnown RBP24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 PAGE1O75459 146 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 PAPLNO95428 1278 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 OLFM2O95897 454 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 APOEP02649 317 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 SRGAP2BP0DMP2 458 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 SLC2A3P11169 496 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 IGFBP4P22692 258 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 GGCXP38435 758 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 KPNA1P52294 538 aaPredicted RBP24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 PDK2Q15119 407 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 LONRF2Q1L5Z9 754 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 TFDP3Q5H9I0 405 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 KAZNQ674X7 775 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 OSBPL8Q9BZF1 889 aa24.92■■□□□ 1.58
ATPAF1-213ENST00000574428 TCRBV7S2A1N4TA0A589 114 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 CKMP06732 381 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 PAFAH1B1P43034 410 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 COPS2P61201 443 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 RING1Q06587 406 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 ADAM15Q13444 863 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 GPR158Q5T848 1215 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 ANKRD54Q6NXT1 300 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 SLC13A5Q86YT5 568 aaPredicted RBP24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 MAP7D3Q8IWC1 876 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 LRRN4CLQ8ND94 238 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 FAM71BQ8TC56 605 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 CARD6Q9BX69 1037 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 KLF16Q9BXK1 252 aaPredicted RBP24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 SLC46A2Q9BY10 475 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 RNF14Q9UBS8 474 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 CDH22Q9UJ99 828 aa24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 TTC7AQ9ULT0 858 aaPredicted RBP24.91■■□□□ 1.58
ATPAF1-213ENST00000574428 hCG_1818297A0A087WSY0 165 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 TRAV19A0A0A6YYK7 116 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 FAM72CH0Y354 149 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 IRF1P10914 325 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 CETN2P41208 172 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 TAZQ16635 292 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 FAM72AQ5TYM5 149 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 FAM72DQ6L9T8 149 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 SYCE2Q6PIF2 218 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 FAM72BQ86X60 149 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 ING5Q8WYH8 240 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 ZFRQ96KR1 1074 aaKnown RBP24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 SIK2Q9H0K1 926 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 TMEM51Q9NW97 253 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 SZT2Q5T011 3432 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 C2orf16Q68DN1 1984 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 CREB3O43889 395 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 CEBPBP17676 345 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 IL4RP24394 825 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 PTPN7P35236 360 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 COG7P83436 770 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 CKAP4Q07065 602 aaKnown RBP24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 ADCY2Q08462 1091 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 PPP2R5EQ16537 467 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 ARHGAP15Q53QZ3 475 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 HAPLN3Q96S86 360 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 CWC15Q9P013 229 aaKnown RBP24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 OR12D3Q9UGF7 316 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 MRPS23Q9Y3D9 190 aaKnown RBP24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 CPQQ9Y646 472 aa24.9■■□□□ 1.58
ATPAF1-213ENST00000574428 ZNF197O14709 1029 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 GOT1P17174 413 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 NUGGCQ68CJ6 796 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 MICALL1Q8N3F8 863 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 ITFG1Q8TB96 612 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 WBP2Q969T9 261 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 PLD4Q96BZ4 506 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 ZNF670Q9BS34 389 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 AP1M1Q9BXS5 423 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 SMG9Q9H0W8 520 aaKnown RBP24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 SLITRK6Q9H5Y7 841 aa24.89■■□□□ 1.57
ATPAF1-213ENST00000574428 STC2O76061 302 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 POU3F3P20264 500 aaPredicted RBP24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 ZXDBP98169 803 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 NAA30Q147X3 362 aaPredicted RBP24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 ANKRD20A8PQ5CZ79 823 aa24.88■■□□□ 1.57
ATPAF1-213ENST00000574428 EP400NLQ6ZTU2 488 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms