RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 HLA-EP13747 358 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 PRKCHP24723 683 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 GNA15P30679 374 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 HARS2P49590 506 aaKnown RBP11.8□□□□□ -0.52
RPAIN-214ENST00000574003 NUMBP49757 651 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 TBX4P57082 545 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 IRX4P78413 519 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 TAF5Q15542 800 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 TPD52L1Q16890 204 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-214ENST00000574003 EXOC3L4Q17RC7 722 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 PREPLQ4J6C6 727 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-214ENST00000574003 STPG1Q5TH74 334 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 SYPL2Q5VXT5 272 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 KIAA1324Q6UXG2 1013 aaKnown RBP11.8□□□□□ -0.52
RPAIN-214ENST00000574003 GBP6Q6ZN66 633 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 NUDT18Q6ZVK8 323 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 TRMT11Q7Z4G4 463 aaKnown RBP11.8□□□□□ -0.52
RPAIN-214ENST00000574003 ANKS1BQ7Z6G8 1248 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 TAC4Q86UU9 113 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 WDTC1Q8N5D0 677 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 ZNF366Q8N895 744 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 MLKLQ8NB16 471 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 KCNV2Q8TDN2 545 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 DQX1Q8TE96 717 aaKnown RBP11.8□□□□□ -0.52
RPAIN-214ENST00000574003 IRGQQ8WZA9 623 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 FAM149B1Q96BN6 582 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 SPACA7Q96KW9 195 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 HSFY1Q96LI6 401 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 GABRG3Q99928 467 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 CIPCQ9C0C6 399 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 NUP62CLQ9H1M0 184 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 PLCB1Q9NQ66 1216 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 LMBRD1Q9NUN5 540 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 STIM2Q9P246 746 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 THAP10Q9P2Z0 257 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-214ENST00000574003 SLC27A6Q9Y2P4 619 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 TNRC6BQ9UPQ9 1833 aaKnown RBP11.8□□□□□ -0.52
RPAIN-214ENST00000574003 PLXND1Q9Y4D7 1925 aa11.8□□□□□ -0.52
RPAIN-214ENST00000574003 CACNA1EQ15878 2313 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 IGHV1OR15-9A0A0B4J2B8 117 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 LNP1A1A4G5 178 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 TBL1XO60907 577 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 MOCS2O96007 188 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 IGLV3-27P01718 113 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 PRKCSHP14314 528 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 ITPKAP23677 461 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 HLA-FP30511 346 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 ANP32AP39687 249 aaKnown RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 RPL34P49207 117 aaKnown RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 FOXK2Q01167 660 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 ZNF234Q14588 700 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 STILQ15468 1287 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 FUT11Q495W5 492 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 MPPE1Q53F39 396 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 FAM133BQ5BKY9 247 aaKnown RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 PPM1JQ5JR12 505 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 MIIPQ5JXC2 388 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 RNF43Q68DV7 783 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 SDE2Q6IQ49 451 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 DPY19L2P1Q6NXN4 242 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 LPCAT2Q7L5N7 544 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 TMA16Q96EY4 203 aaKnown RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 FCRL2Q96LA5 508 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 MRGPRX1Q96LB2 322 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 EDEM2Q9BV94 578 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 SLC4A5Q9BY07 1137 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 MKRN2Q9H000 416 aaKnown RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 NUCKS1Q9H1E3 243 aaKnown RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 SAMSN1Q9NSI8 373 aaKnown RBP11.79□□□□□ -0.52
RPAIN-214ENST00000574003 ABCB8Q9NUT2 735 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 ELOVL2Q9NXB9 296 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 APEX2Q9UBZ4 518 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 DNAJC12Q9UKB3 198 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 ADAMTS9Q9P2N4 1935 aa11.79□□□□□ -0.52
RPAIN-214ENST00000574003 KNL1Q8NG31 2342 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 CKAP5Q14008 2032 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 C4orf47A7E2U8 309 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 FOXN3O00409 490 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-214ENST00000574003 TM4SF5O14894 197 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 ACSL4O60488 711 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 GRAP2O75791 330 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 FBXO21O94952 628 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 SDHBP21912 280 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 CD70P32970 193 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 RPS24P62847 133 aaKnown RBP11.78□□□□□ -0.52
RPAIN-214ENST00000574003 RPL6Q02878 288 aaKnown RBP11.78□□□□□ -0.52
RPAIN-214ENST00000574003 KCNMA1Q12791 1236 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 PDCLQ13371 301 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 MAN2A1Q16706 1144 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 ADGRF1Q5T601 910 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 IL31Q6EBC2 164 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 MMS22LQ6ZRQ5 1243 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 CHST9Q7L1S5 443 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 SLC41A1Q8IVJ1 513 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 CFAP52Q8N1V2 620 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 GPT2Q8TD30 523 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 SHC3Q92529 594 aa11.78□□□□□ -0.52
RPAIN-214ENST00000574003 PRICKLE1Q96MT3 831 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-214ENST00000574003 CPXM1Q96SM3 734 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms