RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 C2orf42Q9NWW7 574 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 OSER1Q9NX31 292 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 SLC8A2Q9UPR5 921 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 CTNND2Q9UQB3 1225 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 MYH10P35580 1976 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 A0A1W2PQH9 124 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 CYP26A1O43174 497 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 PDGFAP04085 211 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 CYP17A1P05093 508 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 CCDC192P0DO97 292 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 IRF1P10914 325 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 RALAP11233 206 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 VDRP11473 427 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 CD19P15391 556 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 HOXA6P31267 233 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 OPRD1P41143 372 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 MAPK8P45983 427 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 SLC6A11P48066 632 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 GAD2Q05329 585 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 DMWDQ09019 674 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 GAB4Q2WGN9 574 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 RAB41Q5JT25 222 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 C10orf120Q5SQS8 335 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 LY6G5CQ5SRR4 150 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 BTBD8Q5XKL5 378 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 PKN3Q6P5Z2 889 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 KLHDC10Q6PID8 442 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 SYT13Q7L8C5 426 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 CCDC186Q7Z3E2 898 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 SCD5Q86SK9 330 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 TADA2BQ86TJ2 420 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 PIGZQ86VD9 579 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 CREBRFQ8IUR6 639 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 TRIM59Q8IWR1 403 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 BBS7Q8IWZ6 715 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 PPM1KQ8N3J5 372 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 DCLK2Q8N568 766 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 RPLP0P6Q8NHW5 317 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 LMO3Q8TAP4 145 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 UBA3Q8TBC4 463 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 EZH1Q92800 747 aaPredicted RBP7.81□□□□□ -1.16
NUP88-205ENST00000572809 SECISBP2LQ93073 1101 aaKnown RBP7.81□□□□□ -1.16
NUP88-205ENST00000572809 WBP2Q969T9 261 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 ALKBH8Q96BT7 664 aaKnown RBP7.81□□□□□ -1.16
NUP88-205ENST00000572809 NT5C1BQ96P26 610 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 PNKPQ96T60 521 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 EPC1Q9H2F5 836 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 NMUR1Q9HB89 426 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 TIMMDC1Q9NPL8 285 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.81□□□□□ -1.16
NUP88-205ENST00000572809 CLIC5Q9NZA1 410 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 NCDNQ9UBB6 729 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 HESX1Q9UBX0 185 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 RWDD2AQ9UIY3 292 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 NAGPAQ9UK23 515 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 NUDT5Q9UKK9 219 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 TSPAN16Q9UKR8 245 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 RAB23Q9ULC3 237 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 PCDHB4Q9Y5E5 795 aa7.81□□□□□ -1.16
NUP88-205ENST00000572809 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.81□□□□□ -1.16
NUP88-205ENST00000572809 PTPRZ1P23471 2315 aaPredicted RBP7.8□□□□□ -1.16
NUP88-205ENST00000572809 FANCMQ8IYD8 2048 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 A0A0A0MRY4 1105 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 CCDC163A0A0D9SF12 145 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 A0A1B0GTH6 734 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 TGFBR3LH3BV60 316 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 K7EQS6 105 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 XPO1O14980 1071 aaKnown RBP7.8□□□□□ -1.16
NUP88-205ENST00000572809 AFPP02771 609 aaKnown RBP7.8□□□□□ -1.16
NUP88-205ENST00000572809 APODP05090 189 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 PAEPP09466 180 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 ADH5P11766 374 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 VAMP1P23763 118 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 ITGB7P26010 798 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 HOXC13P31276 330 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 EIF2DP41214 584 aaKnown RBP7.8□□□□□ -1.16
NUP88-205ENST00000572809 TKTL1P51854 596 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 COG7P83436 770 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 GOLGA8FQ08AF8 430 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 GOLGA8DPQ0D2H9 430 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 SIM2Q14190 667 aaPredicted RBP7.8□□□□□ -1.16
NUP88-205ENST00000572809 CNGA2Q16280 664 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 GOLGA7BQ2TAP0 167 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 ANO4Q32M45 955 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 C2orf27AQ580R0 203 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 ARSJQ5FYB0 599 aaPredicted RBP7.8□□□□□ -1.16
NUP88-205ENST00000572809 PM20D1Q6GTS8 502 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 TMEM270Q6UE05 265 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 LINC00114Q6XXX2 140 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 PRR23BQ6ZRT6 265 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 RRAGAQ7L523 313 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 WDR5BQ86VZ2 330 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 TTC30AQ86WT1 665 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 TMEM25Q86YD3 366 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 KIAA2013Q8IYS2 634 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 ARHGAP18Q8N392 663 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 UBR7Q8N806 425 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 NAT16Q8N8M0 369 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 MLKLQ8NB16 471 aa7.8□□□□□ -1.16
NUP88-205ENST00000572809 CDK5RAP1Q96SZ6 601 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms