RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 CCDC33Q8N5R6 958 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 ALLCQ8N6M5 410 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 IL17RCQ8NAC3 791 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 IPO4Q8TEX9 1081 aaKnown RBP13.96□□□□□ -0.17
RPAIN-207ENST00000570883 ACDQ96AP0 544 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 XPO6Q96QU8 1125 aaKnown RBP13.96□□□□□ -0.17
RPAIN-207ENST00000570883 HHIPQ96QV1 700 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 TRIM62Q9BVG3 475 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 PDCL3Q9H2J4 239 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 MMP17Q9ULZ9 603 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 TLR6Q9Y2C9 796 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 SPTBN4Q9H254 2564 aa13.96□□□□□ -0.17
RPAIN-207ENST00000570883 THADAQ6YHU6 1953 aa13.96□□□□□ -0.18
RPAIN-207ENST00000570883 NUP205Q92621 2012 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 GOLGA6L7A0A1B0GV03 622 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 TBC1D3BA6NDS4 549 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 SGK1O00141 431 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 CAPN9O14815 690 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 TSPAN3O60637 253 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 ADAM23O75077 832 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 DAB1O75553 588 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 TRUB2O95900 331 aaKnown RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 CYP1A1P04798 512 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 HOXD9P28356 352 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 GABRB2P47870 512 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 DGKGP49619 791 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 NRLP54845 237 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 MRPS21P82921 87 aaKnown RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 CDR2Q01850 454 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 SLC6A3Q01959 620 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 SRSF5Q13243 272 aaKnown RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 DCAF6Q58WW2 860 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 OTUD1Q5VV17 481 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 NAA35Q5VZE5 725 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 RFWD3Q6PCD5 774 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 ZNF677Q86XU0 584 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 DEFB106AQ8N104 65 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 SUMF1Q8NBK3 374 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 ZNF397Q8NF99 534 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 CCDC26Q8TAB7 109 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 ATRIPQ8WXE1 791 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 BAP1Q92560 729 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 MYEOVQ96EZ4 313 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 PRICKLE1Q96MT3 831 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 NAP1L5Q96NT1 182 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 ADAM33Q9BZ11 813 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 EPC1Q9H2F5 836 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 SYNCQ9H7C4 482 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 CALCOCO1Q9P1Z2 691 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 XPO7Q9UIA9 1087 aaKnown RBP13.95□□□□□ -0.18
RPAIN-207ENST00000570883 SLC8A2Q9UPR5 921 aa13.95□□□□□ -0.18
RPAIN-207ENST00000570883 ACSL4O60488 711 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 KLF8O95600 359 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-207ENST00000570883 SLC11A2P49281 568 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 GEN1Q17RS7 908 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 SKOR2Q2VWA4 1001 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-207ENST00000570883 ZC3H12AQ5D1E8 599 aaKnown RBP13.94□□□□□ -0.18
RPAIN-207ENST00000570883 EFHC1Q5JVL4 640 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 EGFLAMQ63HQ2 1017 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 RNF43Q68DV7 783 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 TMEM92Q6UXU6 159 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 WDR5BQ86VZ2 330 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 LONP2Q86WA8 852 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 XYLT1Q86Y38 959 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 UNC45BQ8IWX7 931 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 TXNDC5Q8NBS9 432 aaKnown RBP13.94□□□□□ -0.18
RPAIN-207ENST00000570883 OLIG1Q8TAK6 271 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 DDI1Q8WTU0 396 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 CPA5Q8WXQ8 436 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 PCDHB18PQ96TA0 734 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 SEMA4AQ9H3S1 761 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 SLC27A6Q9Y2P4 619 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 STARD13Q9Y3M8 1113 aa13.94□□□□□ -0.18
RPAIN-207ENST00000570883 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
RPAIN-207ENST00000570883 CEP250Q9BV73 2442 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 HRO43593 1189 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 MOCS2O96007 188 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-207ENST00000570883 LMNAP02545 664 aaKnown RBP13.93□□□□□ -0.18
RPAIN-207ENST00000570883 CYBBP04839 570 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 TFE3P19532 575 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-207ENST00000570883 ZNF445P59923 1031 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 CDK17Q00537 523 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 ARID5AQ03989 594 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 CRY1Q16526 586 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 HSF5Q4G112 596 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-207ENST00000570883 PREPLQ4J6C6 727 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-207ENST00000570883 MPPE1Q53F39 396 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 PIK3R6Q5UE93 754 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 TRNP1Q6NT89 227 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 MMS22LQ6ZRQ5 1243 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 ERICH1Q86X53 443 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 ZDHHC17Q8IUH5 632 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 ZNF513Q8N8E2 541 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-207ENST00000570883 WFDC5Q8TCV5 224 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 AZIN2Q96A70 460 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 C18orf8Q96DM3 657 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 ACOX2Q99424 681 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 NUCKS1Q9H1E3 243 aaKnown RBP13.93□□□□□ -0.18
RPAIN-207ENST00000570883 FAM204AQ9H8W3 233 aa13.93□□□□□ -0.18
RPAIN-207ENST00000570883 DDIT4Q9NX09 232 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms