RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ZDHHC11BP0C7U3 371 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 GJA1P17302 382 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 CEBPBP17676 345 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 POU3F3P20264 500 aaPredicted RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 PCK1P35558 622 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 MTHFRP42898 656 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 EPHA5P54756 1037 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 AIF1P55008 147 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 RWDD2BP57060 319 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 TBX4P57082 545 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 ETF1P62495 437 aaKnown RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 COG7P83436 770 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 OGDHQ02218 1023 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 VAC14Q08AM6 782 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZNF252P-AS1Q0IIN9 211 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 ADGRE1Q14246 886 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 RPS6KA1Q15418 735 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 TEAD2Q15562 447 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 TRIP4Q15650 581 aaPredicted RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 CCDC85BQ15834 202 aaPredicted RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 CLUL1Q15846 466 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SMTNL2Q2TAL5 461 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 BRMS1LQ5PSV4 323 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 ATAT1Q5SQI0 421 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 CCDC181Q5TID7 509 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SNX30Q5VWJ9 437 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SYPL2Q5VXT5 272 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 TXNDC8Q6A555 127 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 KLHDC10Q6PID8 442 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SYT10Q6XYQ8 523 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 TMEM184AQ6ZMB5 413 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 Q7L0L9 218 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 POLNQ7Z5Q5 900 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLFN11Q7Z7L1 901 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 GPR149Q86SP6 731 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 UNC45BQ8IWX7 931 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 ATP6V0D2Q8N8Y2 350 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 LRRC57Q8N9N7 239 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SHKBP1Q8TBC3 707 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 ADAMTS19Q8TE59 1207 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 PPM1EQ8WY54 764 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 HSPH1Q92598 858 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 PLD4Q96BZ4 506 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 RBM41Q96IZ5 413 aaKnown RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 NECTIN4Q96NY8 510 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 NPY6RQ99463 290 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 CDX2Q99626 313 aaPredicted RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 IRX2Q9BZI1 471 aaPredicted RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 ADAM7Q9H2U9 754 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 WDCPQ9H6R7 721 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 KIF9Q9HAQ2 790 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 PIGVQ9NUD9 493 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 OSER1Q9NX31 292 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SMPD4Q9NXE4 827 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 DDX56Q9NY93 547 aaKnown RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 PCSK1NQ9UHG2 260 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SFMBT1Q9UHJ3 866 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 CD207Q9UJ71 328 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 NUDT5Q9UKK9 219 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 USP18Q9UMW8 372 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 AP4E1Q9UPM8 1137 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 TLR6Q9Y2C9 796 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SH3BP1Q9Y3L3 701 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 HBS1LQ9Y450 684 aaKnown RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 HYOU1Q9Y4L1 999 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 ALG6Q9Y672 507 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 PATJQ8NI35 1801 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SOBPA7XYQ1 873 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 POM121CA8CG34 1229 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 KCNK3O14649 394 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 ENC1O14682 589 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZNF500O60304 480 aaPredicted RBP6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 F11P03951 625 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 HDCP19113 662 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 TFE3P19532 575 aaPredicted RBP6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 KCNA5P22460 613 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 CTNNA2P26232 953 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 VARSP26640 1264 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 MIPP30301 263 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 GBP2P32456 591 aaPredicted RBP6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 CTNNA1P35221 906 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 ARL4AP40617 200 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 SLC11A2P49281 568 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 HDAC4P56524 1084 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 NTHL1P78549 312 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 SLC25A11Q02978 314 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 RING1Q06587 406 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 ADAM15Q13444 863 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 KCNC3Q14003 757 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 SLC5A9Q2M3M2 681 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 BOLA3Q53S33 107 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZC3H12AQ5D1E8 599 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 PPP6R3Q5H9R7 873 aaPredicted RBP6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 PRSS36Q5K4E3 855 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 STXBP5Q5T5C0 1151 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 ACBD5Q5T8D3 534 aaPredicted RBP6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 LRRC38Q5VT99 294 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 DAB2IPQ5VWQ8 1189 aa6.83□□□□□ -1.32
CTDNEP1-204ENST00000570484 TRNP1Q6NT89 227 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms