RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	GSC	P56915	257 aa	Predicted RBP	18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	CENPC	Q03188	943 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	C1QBP	Q07021	282 aa	Known RBP	18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	ASIC2	Q16515	512 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	EOGT	Q5NDL2	527 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	BRMS1L	Q5PSV4	323 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	FAM102A	Q5T9C2	384 aa	Predicted RBP	18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	NAA35	Q5VZE5	725 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	TPGS1	Q6ZTW0	290 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	FAM183BP	Q6ZVS7	135 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	TERB1	Q8NA31	727 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	CHFR	Q96EP1	664 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	PGAP3	Q96FM1	320 aa	Predicted RBP	18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	SEPT11	Q9NVA2	429 aa	Known RBP	18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	FAM86C1	Q9NVL1	165 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	DDIT4	Q9NX09	232 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	STARD13	Q9Y3M8	1113 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	ITIH6	Q6UXX5	1313 aa		18.7	■□□□□ 0.58
PKD1-238	ENST00000570150	RNF40	O75150	1001 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	ALDH1A2	O94788	518 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	EGF	P01133	1207 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	IGLV3-25	P01717	112 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	FYN	P06241	537 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	SP9	P0CG40	484 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	TNFAIP3	P21580	790 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	NBL1	P41271	181 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	PRKCI	P41743	596 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	DGKE	P52429	567 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	ZBED6	P86452	979 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	FMO1	Q01740	532 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	ARID5A	Q03989	594 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	CSTF1	Q05048	431 aa	Known RBP	18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	TSR1	Q2NL82	804 aa	Known RBP	18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	SLC25A52	Q3SY17	297 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	PHF13	Q86YI8	300 aa	Predicted RBP	18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	DEFB106A	Q8N104	65 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	HJURP	Q8NCD3	748 aa	Predicted RBP	18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	CPA5	Q8WXQ8	436 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	TRIM11	Q96F44	468 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	SLC39A13	Q96H72	371 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	ADAM22	Q9P0K1	906 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	FBXO10	Q9UK96	956 aa		18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	LUC7L2	Q9Y383	392 aa	Known RBP	18.69	■□□□□ 0.58
PKD1-238	ENST00000570150	PROB1	E7EW31	1015 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	MSI1	O43347	362 aa	Known RBP	18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	GZMA	P12544	262 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	CLEC16A	Q2KHT3	1053 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	RABGAP1L	Q5R372	815 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	ANKS1B	Q7Z6G8	1248 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	TAC4	Q86UU9	113 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	C11orf74	Q86VG3	221 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	XYLT1	Q86Y38	959 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	WFIKKN2	Q8TEU8	576 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	BAP1	Q92560	729 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	FCRL2	Q96LA5	508 aa	Predicted RBP	18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	CACNA1H	O95180	2353 aa		18.68	■□□□□ 0.58
PKD1-238	ENST00000570150	MIA3	Q5JRA6	1907 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	LRRC53	A6NM62	1247 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	KCNU1	A8MYU2	1149 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	GFRA2	O00451	464 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	SCAMP3	O14828	347 aa	Known RBP	18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	UNG	P13051	313 aa	Predicted RBP	18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	KLHL30	Q0D2K2	578 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	GAB4	Q2WGN9	574 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	ARL13B	Q3SXY8	428 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	FYB2	Q5VWT5	728 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	SYPL2	Q5VXT5	272 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	IRF2BP2	Q7Z5L9	587 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	RPLP0P6	Q8NHW5	317 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	USP33	Q8TEY7	942 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	NT5C3B	Q969T7	300 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	RETREG1	Q9H6L5	497 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	POLM	Q9NP87	494 aa	Predicted RBP	18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	RBM12	Q9NTZ6	932 aa	Known RBP	18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	IFNK	Q9P0W0	207 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150	CAPN11	Q9UMQ6	739 aa		18.67	■□□□□ 0.58
PKD1-238	ENST00000570150		F5H5T6	163 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150		K7EQS6	105 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150		M0QYT0	321 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	APBB3	O95704	486 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	SDC4	P31431	198 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	BYSL	Q13895	437 aa	Known RBP	18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	C10orf76	Q5T2E6	689 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	SPECC1L	Q69YQ0	1117 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	LONP2	Q86WA8	852 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	DRC7	Q8IY82	874 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	NAT16	Q8N8M0	369 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	C3orf20	Q8ND61	904 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	SLC20A1	Q8WUM9	679 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	NELL1	Q92832	810 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	NCAPG	Q9BPX3	1015 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	SELENOO	Q9BVL4	669 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	TTYH3	Q9C0H2	523 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	WDCP	Q9H6R7	721 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	ZNHIT6	Q9NWK9	470 aa	Known RBP	18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	MMP17	Q9ULZ9	603 aa		18.66	■□□□□ 0.58
PKD1-238	ENST00000570150	MOCS3	O95396	460 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	ATP5B	P06576	529 aa	Known RBP	18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	MYBL1	P10243	752 aa		18.65	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms