RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 DTWD2Q8NBA8 298 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 PJA1Q8NG27 643 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 CXorf38Q8TB03 319 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 SH3RF2Q8TEC5 729 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 RNF139Q8WU17 664 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 TMEM174Q8WUU8 243 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 TMEM176AQ96HP8 235 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 CNOT6LQ96LI5 555 aaKnown RBP5.08□□□□□ -1.6
CNOT1-219ENST00000569882 FAM81BQ96LP2 452 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 KCNK16Q96T55 309 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 SLC46A2Q9BY10 475 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 B3GNT5Q9BYG0 378 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 PLA2G2FQ9BZM2 168 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 NAT10Q9H0A0 1025 aaKnown RBP5.08□□□□□ -1.6
CNOT1-219ENST00000569882 CHRDQ9H2X0 955 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 EBF3Q9H4W6 596 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 SYNCQ9H7C4 482 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 GKN1Q9NS71 199 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 OBP2AQ9NY56 170 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 GTSE1Q9NYZ3 720 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 HMGXB4Q9UGU5 601 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 RWDD2AQ9UIY3 292 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 SALL4Q9UJQ4 1053 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 RAB23Q9ULC3 237 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 STRIP2Q9ULQ0 834 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 CEP83Q9Y592 693 aa5.08□□□□□ -1.6
CNOT1-219ENST00000569882 MUC6Q6W4X9 2439 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 SPECC1L-ADORA2AF8WAN1 911 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 M0QYV0 167 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 SCAMP3O14828 347 aaKnown RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 P4HA2O15460 535 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 THAP12O43422 761 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 TLR5O60602 858 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 ADAM11O75078 769 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CILPO75339 1184 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 GLULP15104 373 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 GLB1P16278 677 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 HMGA1P17096 107 aaKnown RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 PFKLP17858 780 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CES1P23141 567 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 FCARP24071 287 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CD68P34810 354 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 ATP5C1P36542 298 aaKnown RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 PLA2G5P39877 138 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 BCAT1P54687 386 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 STARD6P59095 220 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 TPM4P67936 248 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 INCA1Q0VD86 236 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 BST2Q10589 180 aaKnown RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 RUNX3Q13761 415 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 RAPGEF1Q13905 1077 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 ZNF268Q14587 947 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 PON2Q15165 354 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 ANGPT1Q15389 498 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 STX1AQ16623 288 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 ARHGAP44Q17R89 818 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 EXOC3L4Q17RC7 722 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 ANO4Q32M45 955 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 PREPLQ4J6C6 727 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CBWD6Q4V339 395 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CBWD3Q5JTY5 395 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 DGKKQ5KSL6 1271 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CBWD5Q5RIA9 395 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CWF19L1Q69YN2 538 aaKnown RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 SCARA3Q6AZY7 606 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 TRIM68Q6AZZ1 485 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 TTI2Q6NXR4 508 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 GBP6Q6ZN66 633 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 Q6ZS46 218 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 RRAGAQ7L523 313 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 TTC30AQ86WT1 665 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 RALGPS2Q86X27 583 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 MIB1Q86YT6 1006 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 C1orf210Q8IVY1 113 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CCDC117Q8IWD4 279 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CCDC105Q8IYK2 499 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CCDC26Q8TAB7 109 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 SCAMP5Q8TAC9 235 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 SPATA20Q8TB22 786 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 ATRIPQ8WXE1 791 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 OVCA2Q8WZ82 227 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 SEMA4DQ92854 862 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 USP13Q92995 863 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 SLC35C1Q96A29 364 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 FAXDC2Q96IV6 333 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 MYRFLQ96LU7 910 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 UBL7Q96S82 380 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CYP2S1Q96SQ9 504 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 CDK5RAP1Q96SZ6 601 aaKnown RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 PKMYT1Q99640 499 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 HNRNPABQ99729 332 aaKnown RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 INTS2Q9H0H0 1204 aaKnown RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 SDCBP2Q9H190 292 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 MUC3BQ9H195 1237 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 THAP9Q9H5L6 903 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 FAM124BQ9H5Z6 455 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-219ENST00000569882 LMAN1LQ9HAT1 526 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 TRPV4Q9HBA0 871 aa5.07□□□□□ -1.6
CNOT1-219ENST00000569882 APOBEC3GQ9HC16 384 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms