RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 RNF34Q969K3 372 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 SPATA17Q96L03 361 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 OXCT2Q9BYC2 517 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 PCDH9Q9HC56 1237 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 DTLQ9NZJ0 730 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 ATP8A1Q9Y2Q0 1164 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 LCHNA4D1U4 455 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 SLC38A8A6NNN8 435 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 H3BRJ5 948 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 HTRA4P83105 476 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 SMARCB1Q12824 385 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 DDX53Q86TM3 631 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 C2orf15Q8WU43 125 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 RSAD2Q8WXG1 361 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 ZIM3Q96PE6 472 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 TRIM62Q9BVG3 475 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 OGFRQ9NZT2 677 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 ITIH2P19823 946 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 RBL1P28749 1068 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 USP29Q9HBJ7 922 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 RCOR3Q9P2K3 495 aaPredicted RBP11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 NUP205Q92621 2012 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 GOLGA6BA6NDN3 693 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 PPFIA2O75334 1257 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 ABLIM3O94929 683 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 CSPG5O95196 566 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 URODP06132 367 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 GBP1P32455 592 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 RPL22P35268 128 aaKnown RBP11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 AIF1P55008 147 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 ARL13BQ3SXY8 428 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 CCDC25Q86WR0 208 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 EPB41L4BQ9H329 900 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 ARHGEF38Q9NXL2 777 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 OR12D3Q9UGF7 316 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 ANAPC5Q9UJX4 755 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 ZMYND8Q9ULU4 1186 aaPredicted RBP11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 CDH23Q9H251 3354 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 DCLK1O15075 740 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 FGF18O76093 207 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 RTN3O95197 1032 aaPredicted RBP11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 RARGP13631 454 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 CAPN2P17655 700 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 TPI1P60174 286 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 RPL10AP62906 217 aaKnown RBP11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 EFEMP1Q12805 493 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 KRT222Q8N1A0 295 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 OR2W6PQ8NHA6 318 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 ZNF461Q8TAF7 563 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 UBLCP1Q8WVY7 318 aaPredicted RBP11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 SIK2Q9H0K1 926 aa11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.31□□□□□ -0.61e-6■■□□□ 11.4
PDXDC1-216ENST00000569715 AFF4Q9UHB7 1163 aaKnown RBP11.31□□□□□ -0.6
PDXDC1-216ENST00000569715 DNALI1O14645 258 aaPredicted RBP11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 KCNN4O15554 427 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 LRIG2O94898 1065 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 MOCS2O96007 188 aaPredicted RBP11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 HIBCHQ6NVY1 386 aaPredicted RBP11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 MSANTD2Q6P1R3 559 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 SPRED2Q7Z698 418 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 IQCKQ8N0W5 287 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 NPWQ8N729 165 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 OLFM3Q96PB7 478 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 CCSER2Q9H7U1 834 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 CYP4F11Q9HBI6 524 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 LRRC4CQ9HCJ2 640 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 PRDM10Q9NQV6 1147 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 MTRF1LQ9UGC7 380 aaKnown RBP11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 PAGE1O75459 146 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 SYF2O95926 243 aaKnown RBP11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 ERCC2P18074 760 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 GAD2Q05329 585 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 ARTNQ5T4W7 220 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 FIBCD1Q8N539 461 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 LRRC45Q96CN5 670 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 PLAAQ9Y263 795 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 OAS2P29728 719 aaKnown RBP11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 CFAP58Q5T655 872 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 RNASEH2BQ5TBB1 312 aaKnown RBP11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 ANKRD22Q5VYY1 191 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 MIB1Q86YT6 1006 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 KLHL23Q8NBE8 558 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 LGMNQ99538 433 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 SEMA4AQ9H3S1 761 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 YIPF1Q9Y548 306 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 SHROOM3Q8TF72 1996 aa11.3□□□□□ -0.6
PDXDC1-216ENST00000569715 TEX28O15482 410 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 SPATA31D3P0C874 917 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 VAV1P15498 845 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 ZFXP17010 805 aaPredicted RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 CCR1P32246 355 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 CA8P35219 290 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 CBX1P83916 185 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 SYCP2LQ5T4T6 812 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 SPATA31D4Q6ZUB0 917 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 HERC6Q8IVU3 1022 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 ARHGAP18Q8N392 663 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 CCHCR1Q8TD31 782 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms